RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SLC37A1P57057 533 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 RPL15P61313 204 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 RBM6P78332 1123 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 FOXD4Q12950 439 aaPredicted RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 PUM3Q15397 648 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 TBRG1Q3YBR2 411 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 UBAP2Q5T6F2 1119 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 TTC22Q5TAA0 569 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 ISM2Q6H9L7 571 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 ZNF793Q6ZN11 406 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 SLC2A12Q8TD20 617 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 MCRS1Q96EZ8 462 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 REXO5Q96IC2 774 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 THOC3Q96J01 351 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 GPR78Q96P69 363 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 RMDN3Q96TC7 470 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 PIMREGQ9BSJ6 248 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 RTKNQ9BST9 563 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 ISCA1Q9BUE6 129 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 TUBB6Q9BUF5 446 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 CRB3Q9BUF7 120 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 ZHX3Q9H4I2 956 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 EPS8L2Q9H6S3 715 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 SFXN1Q9H9B4 322 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 OBP2BQ9NPH6 170 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 PRDM8Q9NQV8 689 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 TMEM45AQ9NWC5 275 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 MAP3K20Q9NYL2 800 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 HERC5Q9UII4 1024 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 ZNF112Q9UJU3 913 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 MAGED2Q9UNF1 606 aaPredicted RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 LAS1LQ9Y4W2 734 aaKnown RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.62□□□□□ -1.83
HERC4-215ENST00000515753 HS3ST3B1Q9Y662 390 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 DGKBQ9Y6T7 804 aa3.62□□□□□ -1.83
HERC4-215ENST00000515753 URB2Q14146 1524 aaKnown RBP3.61□□□□□ -1.83
HERC4-215ENST00000515753 KIR2DS5A0A0G2JLQ3 304 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 hCG_1642624A0A1W2PR95 340 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 EFCAB8A8MWE9 144 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 KIR2DS3K7RE56 304 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 ACKR2O00590 384 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 KAT7O95251 611 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 WNT1P04628 370 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 HSD3B1P14060 373 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 GRK6P43250 576 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 CPA2P48052 419 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 FAM3BP58499 235 aaPredicted RBP3.61□□□□□ -1.83
HERC4-215ENST00000515753 SF3A3Q12874 501 aaKnown RBP eCLIP3.61□□□□□ -1.83
HERC4-215ENST00000515753 MTX1Q13505 466 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 PFKFB4Q16877 469 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 KIAA1755Q5JYT7 1200 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 LIN54Q6MZP7 749 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 NFRKBQ6P4R8 1299 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 MMS22LQ6ZRQ5 1243 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 RTL10Q7L3V2 364 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 SLC44A2Q8IWA5 706 aaPredicted RBP3.61□□□□□ -1.83
HERC4-215ENST00000515753 CACNA2D3Q8IZS8 1091 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 PELI3Q8N2H9 469 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 SLC44A5Q8NCS7 719 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 STT3BQ8TCJ2 826 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 ATP2A3Q93084 1043 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 TBATAQ96M53 351 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 CTAGE1Q96RT6 745 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 HTATIP2Q9BUP3 242 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 VPS33BQ9H267 617 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 TXNRD2Q9NNW7 524 aa3.61□□□□□ -1.83
HERC4-215ENST00000515753 C19orf53Q9UNZ5 99 aaPredicted RBP3.61□□□□□ -1.83
HERC4-215ENST00000515753 TOP2AP11388 1531 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 M0QYT0 321 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 PRPF4O43172 522 aaKnown RBP eCLIP3.6□□□□□ -1.83
HERC4-215ENST00000515753 ACTL6BO94805 426 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 TNFRSF6BO95407 300 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 CSTBP04080 98 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 FGF2P09038 288 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 AKT1P31749 480 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 GRK5P34947 590 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 BLMHQ13867 455 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 PGM5Q15124 567 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 ZNF585BQ52M93 769 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 ATPAF1Q5TC12 328 aaPredicted RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 LIPMQ5VYY2 423 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 TTLL5Q6EMB2 1281 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 DHRS13Q6UX07 377 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 LRIG3Q6UXM1 1119 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 ARL14EPQ8N8R7 260 aaPredicted RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 OR1N1Q8NGS0 311 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 CCT6BQ92526 530 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 TRIM63Q969Q1 353 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 ZNF347Q96SE7 839 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 WDR83Q9BRX9 315 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 DDX23Q9BUQ8 820 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 PABPC3Q9H361 631 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 CCDC134Q9H6E4 229 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 SEMA4BQ9NPR2 832 aaPredicted RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 ZBTB40Q9NUA8 1239 aa3.6□□□□□ -1.83
HERC4-215ENST00000515753 LIN7CQ9NUP9 197 aaKnown RBP3.6□□□□□ -1.83
HERC4-215ENST00000515753 TMLHEQ9NVH6 421 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms