RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 ACBD5Q5T8D3 534 aaPredicted RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 FAM102AQ5T9C2 384 aaPredicted RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 OTUD1Q5VV17 481 aaPredicted RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 KIAA0895LQ68EN5 471 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 MMAAQ8IVH4 418 aaKnown RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 ENOX1Q8TC92 643 aaKnown RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 C18orf8Q96DM3 657 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 PGAP3Q96FM1 320 aaPredicted RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 RPL10LQ96L21 214 aaKnown RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 OMDQ99983 421 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 SCNM1Q9BWG6 230 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 TM9SF3Q9HD45 589 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 PIGVQ9NUD9 493 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 ADAMTS1Q9UHI8 967 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 PCDHB9Q9Y5E1 797 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 KMT2BQ9UMN6 2715 aaPredicted RBP18.01■□□□□ 0.47
DDX41-217ENST00000515562 PCNX2A6NKB5 2137 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 CEP295Q9C0D2 2601 aa18.01■□□□□ 0.47
DDX41-217ENST00000515562 A0A1B0GVT2 93 aa18■□□□□ 0.47
DDX41-217ENST00000515562 A0A1W2PP55 124 aa18■□□□□ 0.47
DDX41-217ENST00000515562 LRRC72A6NJI9 287 aa18■□□□□ 0.47
DDX41-217ENST00000515562 SH3BP5O60239 455 aa18■□□□□ 0.47
DDX41-217ENST00000515562 RNASEH2AO75792 299 aaKnown RBP18■□□□□ 0.47
DDX41-217ENST00000515562 F9P00740 461 aa18■□□□□ 0.47
DDX41-217ENST00000515562 MZF1P28698 734 aaPredicted RBP18■□□□□ 0.47
DDX41-217ENST00000515562 PSMD8P48556 350 aa18■□□□□ 0.47
DDX41-217ENST00000515562 CSNK1EP49674 416 aaKnown RBP18■□□□□ 0.47
DDX41-217ENST00000515562 CXCR3P49682 368 aa18■□□□□ 0.47
DDX41-217ENST00000515562 SULT1E1P49888 294 aa18■□□□□ 0.47
DDX41-217ENST00000515562 RNASE9P60153 205 aaKnown RBP18■□□□□ 0.47
DDX41-217ENST00000515562 BNC1Q01954 994 aa18■□□□□ 0.47
DDX41-217ENST00000515562 ZNF423Q2M1K9 1284 aa18■□□□□ 0.47
DDX41-217ENST00000515562 HLA-BQ31612 363 aa18■□□□□ 0.47
DDX41-217ENST00000515562 TAF3Q5VWG9 929 aa18■□□□□ 0.47
DDX41-217ENST00000515562 UNQ6494/PRO21346Q6UXR6 183 aa18■□□□□ 0.47
DDX41-217ENST00000515562 ERICH1Q86X53 443 aa18■□□□□ 0.47
DDX41-217ENST00000515562 EPS8L1Q8TE68 723 aa18■□□□□ 0.47
DDX41-217ENST00000515562 IGSF8Q969P0 613 aa18■□□□□ 0.47
DDX41-217ENST00000515562 NT5C3BQ969T7 300 aa18■□□□□ 0.47
DDX41-217ENST00000515562 GBP4Q96PP9 640 aa18■□□□□ 0.47
DDX41-217ENST00000515562 SPAG5Q96R06 1193 aa18■□□□□ 0.47
DDX41-217ENST00000515562 TKTL2Q9H0I9 626 aa18■□□□□ 0.47
DDX41-217ENST00000515562 WDCPQ9H6R7 721 aa18■□□□□ 0.47
DDX41-217ENST00000515562 ARHGEF38Q9NXL2 777 aa18■□□□□ 0.47
DDX41-217ENST00000515562 TAB2Q9NYJ8 693 aa18■□□□□ 0.47
DDX41-217ENST00000515562 SERGEFQ9UGK8 458 aa18■□□□□ 0.47
DDX41-217ENST00000515562 SLC25A13Q9UJS0 675 aa18■□□□□ 0.47
DDX41-217ENST00000515562 TPX2Q9ULW0 747 aaKnown RBP18■□□□□ 0.47
DDX41-217ENST00000515562 FNDC3AQ9Y2H6 1198 aaKnown RBP18■□□□□ 0.47
DDX41-217ENST00000515562 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 PROS1P07225 676 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 SPINK2P20155 84 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 C5AR1P21730 350 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 SLC8A1P32418 973 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 CDH4P55283 916 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 DEUP1Q05D60 604 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 TRIP6Q15654 476 aaKnown RBP17.99■□□□□ 0.47
DDX41-217ENST00000515562 SLC25A52Q3SY17 297 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 C5orf22Q49AR2 442 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 FKBP15Q5T1M5 1219 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 CDKAL1Q5VV42 579 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 DSG4Q86SJ6 1040 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
DDX41-217ENST00000515562 ZNF677Q86XU0 584 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 XYLT1Q86Y38 959 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 STK40Q8N2I9 435 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 OR2T34Q8NGX1 318 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 FRS2Q8WU20 508 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 PTPRN2Q92932 1015 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 FAM129BQ96TA1 746 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 FEM1AQ9BSK4 669 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 IL21RQ9HBE5 538 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 TM7SF3Q9NS93 570 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 VPS28Q9UK41 221 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 TBC1D30Q9Y2I9 924 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 DAAM1Q9Y4D1 1078 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 NEUROG3Q9Y4Z2 214 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 PCDHGB2Q9Y5G2 931 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 SLCO1B1Q9Y6L6 691 aa17.99■□□□□ 0.47
DDX41-217ENST00000515562 FLRT2O43155 660 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 GOT1P17174 413 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 GGCXP38435 758 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 GALCP54803 685 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 NOMO3P69849 1222 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 FAM193AP78312 1265 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 KIF19Q2TAC6 998 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 NCEH1Q6PIU2 408 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 RBM43Q6ZSC3 357 aaKnown RBP17.98■□□□□ 0.47
DDX41-217ENST00000515562 ADAT2Q7Z6V5 191 aaKnown RBP17.98■□□□□ 0.47
DDX41-217ENST00000515562 AADATQ8N5Z0 425 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 ALG14Q96F25 216 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 CAMK1GQ96NX5 476 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 SIK2Q9H0K1 926 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 NEUROG2Q9H2A3 272 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 GANQ9H2C0 597 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 PCOLCE2Q9UKZ9 415 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 ANKRD6Q9Y2G4 727 aa17.98■□□□□ 0.47
DDX41-217ENST00000515562 USP24Q9UPU5 2620 aa17.97■□□□□ 0.47
DDX41-217ENST00000515562 A0A1W2PPC4 97 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms