RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 NUSAP1Q9BXS6 441 aaKnown RBP10.22□□□□□ -0.77
CCL28-203ENST00000513525 TMEM74BQ9NUR3 256 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 ELOVL2Q9NXB9 296 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 APEX2Q9UBZ4 518 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 CLEC4EQ9ULY5 219 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 JRKLQ9Y4A0 524 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 RAD54BQ9Y620 910 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 PLXNA2O75051 1894 aa10.22□□□□□ -0.77
CCL28-203ENST00000513525 SART1O43290 800 aaKnown RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 MSI1O43347 362 aaKnown RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 TIMM44O43615 452 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 KCNK5O95279 499 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 PRLRP16471 622 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 ITPKAP23677 461 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 SOX5P35711 763 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 APBA1Q02410 837 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 GFPT1Q06210 699 aaPredicted RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 ZNF33AQ06730 810 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 FOXC1Q12948 553 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 NNTQ13423 1086 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 ZNF234Q14588 700 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 NAA30Q147X3 362 aaPredicted RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 ERCC6LQ2NKX8 1250 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 FUT11Q495W5 492 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 TRIM61Q5EBN2 209 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 MPP7Q5T2T1 576 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 NUGGCQ68CJ6 796 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 TMEM215Q68D42 235 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 BEND5Q7L4P6 421 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 ARMCX6Q7L4S7 300 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 ENOSF1Q7L5Y1 443 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 RABEPKQ7Z6M1 372 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 KIAA0907Q7Z7F0 614 aaPredicted RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 SLC41A1Q8IVJ1 513 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.21□□□□□ -0.78
CCL28-203ENST00000513525 ZNF557Q8N988 423 aaPredicted RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 CEP76Q8TAP6 659 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 WFIKKN2Q8TEU8 576 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 CLEC4CQ8WTT0 213 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 STK32AQ8WU08 396 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 TMA16Q96EY4 203 aaKnown RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 NOX5Q96PH1 765 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 USP36Q9P275 1121 aaKnown RBP10.21□□□□□ -0.78
CCL28-203ENST00000513525 INTUQ9ULD6 942 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 CYP8B1Q9UNU6 501 aa10.21□□□□□ -0.78
CCL28-203ENST00000513525 ATXN2Q99700 1313 aaKnown RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 F8VZ95 297 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 PIK3R2O00459 728 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 IRAK2O43187 625 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 MED7O43513 233 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 WIPF1O43516 503 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 CALCAP01258 141 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 FYNP06241 537 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 NCAM1P13591 858 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 CSRP1P21291 193 aaKnown RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 PMLP29590 882 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 HLA-FP30511 346 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 ACADSBP45954 432 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 COPAP53621 1224 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 CKAP4Q07065 602 aaKnown RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 DUOXA1Q1HG43 343 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 FAM133BQ5BKY9 247 aaKnown RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 LRRN4CLQ8ND94 238 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 ZNF419Q96HQ0 510 aaPredicted RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 TRIM62Q9BVG3 475 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 MKRN2Q9H000 416 aaKnown RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 SLC6A17Q9H1V8 727 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 PRDM16Q9HAZ2 1276 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 CAPN10Q9HC96 672 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 UBE2TQ9NPD8 197 aaPredicted RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 CD93Q9NPY3 652 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 ARGLU1Q9NWB6 273 aaPredicted RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCL28-203ENST00000513525 DNAJC12Q9UKB3 198 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 NENFQ9UMX5 172 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 SLC6A14Q9UN76 642 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 SAR1BQ9Y6B6 198 aa10.2□□□□□ -0.78
CCL28-203ENST00000513525 V9GYY5 206 aaPredicted RBP10.2□□□□□ -0.78
CCL28-203ENST00000513525 DOCK9Q9BZ29 2069 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 A0A087X0T9 212 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 MACROD2A1Z1Q3 448 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 CTAGE15A4D2H0 777 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 ACSL4O60488 711 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 TSPAN3O60637 253 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 AVPP01185 164 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 IGLV3-19P01714 112 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 TUBBP07437 444 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 SERPINF2P08697 491 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 FAM228BP0C875 321 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 CTAGE8P0CG41 777 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 KRT5P13647 590 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 ENGP17813 658 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 GNA15P30679 374 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 SLC11A2P49281 568 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 TBX4P57082 545 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 SHC2P98077 582 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 ARID5AQ03989 594 aa10.19□□□□□ -0.78
CCL28-203ENST00000513525 PTK2Q05397 1052 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms