RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SLCO6A1Q86UG4 719 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 CIR1Q86X95 450 aaPredicted RBP15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 PASD1Q8IV76 773 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 OR2T34Q8NGX1 318 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 PTPRN2Q92932 1015 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 RNF34Q969K3 372 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 SKA1Q96BD8 255 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 RPL10LQ96L21 214 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 NEUROG2Q9H2A3 272 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 TOR4AQ9NXH8 423 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 TPX2Q9ULW0 747 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 PKD1L2Q7Z442 2459 aa15.17■□□□□ 0.02
CCHCR1-229ENST00000512418 PLXNA2O75051 1894 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 SYNJ2BP-COX16A0A087WUM0 186 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 H0Y8X5 98 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 DKK1O94907 266 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 CAPNS1P04632 268 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 C5AR1P21730 350 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 MZF1P28698 734 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 MTIF2P46199 727 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 PLK1P53350 603 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 ADPRHP54922 357 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 C21orf59P57076 290 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 INAVAQ3KP66 663 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 KCNT1Q5JUK3 1230 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 LRSAM1Q6UWE0 723 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 OLFML1Q6UWY5 402 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 C11orf57Q6ZUT1 292 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 FAM183BPQ6ZVS7 135 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 SND1Q7KZF4 910 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 IRF2BP1Q8IU81 584 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 STK40Q8N2I9 435 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 AADATQ8N5Z0 425 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 MLKLQ8NB16 471 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 SLC6A18Q96N87 628 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 RPRD1AQ96P16 312 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 SPAG5Q96R06 1193 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 PPP1R9BQ96SB3 815 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 COX16Q9P0S2 106 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 RALYQ9UKM9 306 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 BTBD3Q9Y2F9 522 aa15.16■□□□□ 0.02
CCHCR1-229ENST00000512418 TP53BP1Q12888 1972 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 C10orf142B7Z368 130 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 KCNK3O14649 394 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 TNFSF14O43557 240 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 DAB1O75553 588 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 GRAP2O75791 330 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 IL1BP01584 269 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 ATXN1LP0C7T5 689 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 GOT1P17174 413 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 KRT9P35527 623 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 CCR5P51681 352 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 CENPCQ03188 943 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 SCAPQ12770 1279 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 AUHQ13825 339 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 OR6B2Q6IFH4 312 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 FBXL22Q6P050 247 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 SLC26A9Q7LBE3 791 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 PROSER1Q86XN7 944 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 FRS2Q8WU20 508 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 SYNCQ9H7C4 482 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 SIX2Q9NPC8 291 aa15.15■□□□□ 0.02
CCHCR1-229ENST00000512418 PLXNB3Q9ULL4 1909 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 A0A1B0GTQ1 180 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 ERBB2P04626 1255 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 VAV1P15498 845 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 NOS2P35228 1153 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 NUMBP49757 651 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 SLC6A3Q01959 620 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 NME3Q13232 169 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 KCNJ12Q14500 433 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 MAN2A1Q16706 1144 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 PTPN20Q4JDL3 420 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 TMPRSS7Q7RTY8 843 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 DSG4Q86SJ6 1040 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 ZDHHC17Q8IUH5 632 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 FAM114A1Q8IWE2 563 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 ZNF397Q8NF99 534 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 OR14C36Q8NHC7 312 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 ELF4Q99607 663 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 EBF2Q9HAK2 575 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 AASDHPPTQ9NRN7 309 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 RRN3Q9NYV6 651 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 SLC25A13Q9UJS0 675 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 DNAJC12Q9UKB3 198 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 AJAP1Q9UKB5 411 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 VANGL2Q9ULK5 521 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 HS3ST4Q9Y661 456 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 PTPRBP23467 1997 aa15.14■□□□□ 0.01
CCHCR1-229ENST00000512418 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 M0QYT0 321 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 TAF4O00268 1085 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 SLC7A4O43246 635 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms