RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 E7ENQ6 273 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 IRAK2O43187 625 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 ACSL4O60488 711 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 RTN2O75298 545 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 NR3C1P04150 777 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 SRPRAP08240 638 aaKnown RBP12.63□□□□□ -0.39
DDR1-267ENST00000512336 TRIM49P0CI25 452 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 TRIM49CP0CI26 452 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 GIMD1P0DJR0 217 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 GCLMP48507 274 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 SLC11A2P49281 568 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 SLC8A3P57103 927 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
DDR1-267ENST00000512336 SKOR1P84550 965 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 ADIGQ0VDE8 80 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 CUL4BQ13620 913 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 KMT5BQ4FZB7 885 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 PITRM1Q5JRX3 1037 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 ARHGAP17Q68EM7 881 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 CCDC81Q6ZN84 652 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 EXD3Q8N9H8 876 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 ANKRD52Q8NB46 1076 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 HJURPQ8NCD3 748 aaPredicted RBP12.63□□□□□ -0.39
DDR1-267ENST00000512336 GPT2Q8TD30 523 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 PTPRN2Q92932 1015 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 TATDN2Q93075 761 aa12.63□□□□□ -0.39
DDR1-267ENST00000512336 RPL10LQ96L21 214 aaKnown RBP12.63□□□□□ -0.39
DDR1-267ENST00000512336 LY6G6EA0A0G2JKS1 128 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 PVALEFA0A1B0GWK0 134 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 TERTO14746 1132 aaKnown RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 THEGLP0DJG4 465 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 VAV1P15498 845 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 NUDT1P36639 197 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 VAMP7P51809 220 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 RAD23BP54727 409 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 NFKB2Q00653 900 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 ECT2LQ008S8 904 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 CDH18Q13634 790 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 STK38Q15208 465 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 ISXQ2M1V0 245 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 RNF219Q5W0B1 726 aaPredicted RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 NADSYN1Q6IA69 706 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 KIAA0895Q8NCT3 520 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 TMEM174Q8WUU8 243 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 FAM131CQ96AQ9 280 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 APOLD1Q96LR9 279 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 MYOCQ99972 504 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
DDR1-267ENST00000512336 ABCG4Q9H172 646 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 LRRC4Q9HBW1 653 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 CISHQ9NSE2 258 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 ABCC13Q9NSE7 274 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 CEP83Q9Y592 693 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 U3KQA8 63 aa12.62□□□□□ -0.39
DDR1-267ENST00000512336 NYNRINQ9P2P1 1898 aaKnown RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 PMS2P1A4D2B8 440 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 GOLGA6L4A6NEF3 574 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 PRAMEF26H0Y7S4 382 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 XPO1O14980 1071 aaKnown RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 PIAS2O75928 621 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 IGLV3-27P01718 113 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 GP1BAP07359 652 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 ALPPL2P10696 532 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 AFMP43652 599 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 NUMBP49757 651 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 PPP3CAQ08209 521 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 KCNMA1Q12791 1236 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 STK4Q13043 487 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 CLN3Q13286 438 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 ELAVL3Q14576 367 aaKnown RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 NUGGCQ68CJ6 796 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 MSANTD2Q6P1R3 559 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 TRIM69Q86WT6 500 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 CFAP52Q8N1V2 620 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 MAPK15Q8TD08 544 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 CCDC97Q96F63 343 aaPredicted RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 ATXN7L3BQ96GX2 97 aa12.61□□□□□ -0.39
DDR1-267ENST00000512336 NUCKS1Q9H1E3 243 aaKnown RBP12.61□□□□□ -0.39
DDR1-267ENST00000512336 KDM4CQ9H3R0 1056 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms