RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ULK2Q8IYT8 1036 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PLD5Q8N7P1 536 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 P2RY11Q96G91 374 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 MRPL45Q9BRJ2 306 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 DCUN1D5Q9BTE7 237 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ELOVL4Q9GZR5 314 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 DENND2DQ9H6A0 471 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 DHX33Q9H6R0 707 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 ZFYVE28Q9HCC9 887 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 EXOSC4Q9NPD3 245 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 DMAP1Q9NPF5 467 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 CHCHD3Q9NX63 227 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 TMEM59LQ9UK28 342 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 COQ4Q9Y3A0 265 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATP6AP2A0A1C7CYW4 349 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 STRNO43815 780 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATP6AP2O75787 350 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 MTA2O94776 668 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 COX4I1P13073 169 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATP6V1C1P21283 382 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 FASP25445 335 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SERPINB10P48595 397 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PCYT1AP49585 367 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 NRLP54845 237 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 OXCT1P55809 520 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 TBX4P57082 545 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 RIPK1Q13546 671 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ACVR2BQ13705 512 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ARHGEF7Q14155 803 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PACS1Q6VY07 963 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PIGWQ7Z7B1 504 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 TLK2Q86UE8 772 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 DHFR2Q86XF0 187 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 XYLT1Q86Y38 959 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SLC41A1Q8IVJ1 513 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 P3H2Q8IVL5 708 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SLC22A9Q8IVM8 553 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 C1orf127Q8N9H9 656 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 C12orf50Q8NA57 414 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 B3GALNT2Q8NCR0 500 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 OR9Q1Q8NGQ5 310 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PIK3R5Q8WYR1 880 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 NDRG1Q92597 394 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 IL22Q9GZX6 179 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 CAB39LQ9H9S4 337 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 NMRK2Q9NPI5 230 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SYBUQ9NX95 663 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 RRN3Q9NYV6 651 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATXN2Q99700 1313 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 SNED1Q8TER0 1413 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 KDM1AO60341 852 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 B4GALT4O60513 344 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 KATNA1O75449 491 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 CYP1A1P04798 512 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 SERPIND1P05546 499 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 UNGP13051 313 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 OR1E1P30953 314 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ATP6V1E1P36543 226 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 GRIA4P48058 902 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PPP3CCP48454 512 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 MFSD10Q14728 455 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 ARCQ7LC44 396 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 FBXO39Q8N4B4 442 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 BHLHE22Q8NFJ8 381 aaPredicted RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 MPP4Q96JB8 637 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 PPP1R10Q96QC0 940 aaKnown RBP8.2□□□□□ -1.1
NEK1-208ENST00000512193 ACOX2Q99424 681 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 VAT1Q99536 393 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 TBL1YQ9BQ87 522 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SIKE1Q9BRV8 207 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 MTFR1LQ9H019 292 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 LHX5Q9H2C1 402 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 TMEM161AQ9NX61 479 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 SORCS3Q9UPU3 1222 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 FAM50BQ9Y247 325 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 NDUFAF1Q9Y375 327 aa8.2□□□□□ -1.1
NEK1-208ENST00000512193 GPR25O00155 361 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PSMD12O00232 456 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 HDAC3O15379 428 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PARNO95453 639 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 BPGMP07738 259 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CFHP08603 1231 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CCDC166P0CW27 439 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 HOXD10P28358 340 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RGS2P41220 211 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ALDH1A3P47895 512 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 SCNN1GP51170 649 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 SYTL3Q4VX76 610 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 ANKS6Q68DC2 871 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 VSTM1Q6UX27 236 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 LPCAT2Q7L5N7 544 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RRM2BQ7LG56 351 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 PLPPR4Q7Z2D5 763 aa8.19□□□□□ -1.1
NEK1-208ENST00000512193 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 C18orf25Q96B23 403 aaPredicted RBP8.19□□□□□ -1.1
NEK1-208ENST00000512193 NDNQ99608 321 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms