RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 FAM237AA0A1B0GTK4 181 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3FA6NER0 549 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3LB9A6J9 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3HP0C7X1 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ADORA2AP29274 412 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RCVRNP35243 200 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RPA3P35244 121 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 ATP5C1P36542 298 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 SERPINB5P36952 375 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RAP1GAPP47736 663 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RXRGP48443 463 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 FXR2P51116 673 aaKnown RBP eCLIP5.88□□□□□ -1.474e-6■■□□□ 13.5
USP38-203ENST00000511739 MYBPC1Q00872 1141 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ST3GAL1Q11201 340 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NOGQ13253 232 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NR1I3Q14994 352 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NBPF12Q5TAG4 269 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 DDI2Q5TDH0 399 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3GQ6DHY5 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3CQ6IPX1 549 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ACAD10Q6JQN1 1059 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TTC7BQ86TV6 843 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TBC1D3Q8IZP1 549 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 CCDC185Q8N715 623 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ZFP28Q8NHY6 868 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 LENG9Q96B70 501 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 FAM163AQ96GL9 167 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 FRMD8P1Q9BZ68 369 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 JMJD4Q9H9V9 463 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CYP3A43Q9HB55 503 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 COMMD8Q9NX08 183 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ADPRHL2Q9NX46 363 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TAS2R13Q9NYV9 303 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 LYVE1Q9Y5Y7 322 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 MROH7Q68CQ1 1323 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TAF4O00268 1085 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ATG7O95352 703 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ACAT1P24752 427 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 ITPKBP27987 946 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CHKAP35790 457 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ARF5P84085 180 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ACSM2AQ08AH3 577 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 E2F4Q16254 413 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 DDR2Q16832 855 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RSBN1Q5VWQ0 802 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 TRIQKQ629K1 86 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ACSM2BQ68CK6 577 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 SLC30A9Q6PML9 568 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 MOXD1Q6UVY6 613 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 MILR1Q7Z6M3 343 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 ARID3BQ8IVW6 561 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 AGGF1Q8N302 714 aaeCLIP5.88□□□□□ -1.47
USP38-203ENST00000511739 RIBC1Q8N443 379 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 RASGEF1AQ8N9B8 481 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 SPATA4Q8NEY3 305 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 OR52L1Q8NGH7 329 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TMEM176AQ96HP8 235 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 PIF1Q9H611 641 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NCKIPSDQ9NZQ3 722 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 DNAJC16Q9Y2G8 782 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ADGRG1Q9Y653 693 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 THRAP10827 490 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NFKB1P19838 968 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 PPM1AP35813 382 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 SKIV2L2P42285 1042 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 MPP3Q13368 585 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CRY1Q16526 586 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 TMEM26Q6ZUK4 368 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 LRRC6Q86X45 466 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 SUN3Q8TAQ9 357 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ITGA11Q9UKX5 1188 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 RIC1Q4ADV7 1423 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 TRIM43BA6NCK2 446 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 O00370 1275 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CHN1P15882 459 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 AXLP30530 894 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 PIK3CGP48736 1102 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CCZ1BP86790 482 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CCZ1P86791 482 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 ACVR2BQ13705 512 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 POU6F1Q14863 301 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 NAB2Q15742 525 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 SEL1L3Q68CR1 1132 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 ZNF57Q68EA5 555 aaPredicted RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 FBXO39Q8N4B4 442 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 LZTR1Q8N653 840 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 FLCNQ8NFG4 579 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 EHD4Q9H223 541 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 INTS10Q9NVR2 710 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP38-203ENST00000511739 ARL15Q9NXU5 204 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 FAM205AQ6ZU69 1335 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 LRRC37A3O60309 1634 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 IQCMA0A1B0GVH7 501 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 VSTM5A8MXK1 200 aa5.88□□□□□ -1.47
USP38-203ENST00000511739 CSDE1O75534 798 aaKnown RBP5.88□□□□□ -1.47
USP38-203ENST00000511739 IL6P05231 212 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms