RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 LMLNQ96KR4 655 aa13.22□□□□□ -0.29
COL6A6-203ENST00000511332 MUC3BQ9H195 1237 aa13.22□□□□□ -0.29
COL6A6-203ENST00000511332 TMEM248Q9NWD8 314 aa13.22□□□□□ -0.29
COL6A6-203ENST00000511332 GPATCH2LQ9NWQ4 482 aa13.22□□□□□ -0.29
COL6A6-203ENST00000511332 SLC8A2Q9UPR5 921 aa13.22□□□□□ -0.29
COL6A6-203ENST00000511332 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
COL6A6-203ENST00000511332 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 ILVBLA1L0T0 632 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 H3BRJ5 948 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 PJA2O43164 708 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 DLDP09622 509 aaKnown RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 RARAP10276 462 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 TCF4P15884 667 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 IL1R2P27930 398 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 NTSR1P30989 418 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 GJC1P36383 396 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 ARL4AP40617 200 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 PLK1P53350 603 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 PPP6R3Q5H9R7 873 aaPredicted RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 KCNT1Q5JUK3 1230 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 ARTNQ5T4W7 220 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 RNF219Q5W0B1 726 aaPredicted RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 C11orf63Q6NUN7 778 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 NLRP14Q86W24 1093 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 RTL3Q8N8U3 475 aaKnown RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 TXNDC5Q8NBS9 432 aaKnown RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 DESI2Q9BSY9 194 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 C2orf49Q9BVC5 232 aaPredicted RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 THAP10Q9P2Z0 257 aaPredicted RBP13.21□□□□□ -0.29
COL6A6-203ENST00000511332 ZNF212Q9UDV6 495 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 VPS28Q9UK41 221 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.29
COL6A6-203ENST00000511332 DAPK3O43293 454 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SPOPO43791 374 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SRPRAP08240 638 aaKnown RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 HOXB2P14652 356 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 HCAR3P49019 387 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 DGKEP52429 567 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SATB1Q01826 763 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 KRT81Q14533 505 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 ZNF234Q14588 700 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 STARD3Q14849 445 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 ANGPT1Q15389 498 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 CA9Q16790 459 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 FNDC3BQ53EP0 1204 aaKnown RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 DCAF4L2Q8NA75 395 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 KDM1BQ8NB78 822 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 GABRG3Q99928 467 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 FEM1AQ9BSK4 669 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
COL6A6-203ENST00000511332 NUP205Q92621 2012 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
COL6A6-203ENST00000511332 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 SGK1O00141 431 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 BUB1BO60566 1050 aaPredicted RBP13.19□□□□□ -0.3
COL6A6-203ENST00000511332 RAMP2O60895 175 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CCDC175P0C221 793 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 GOT1P17174 413 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
COL6A6-203ENST00000511332 NAP1L1P55209 391 aaKnown RBP13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CDH6P55285 790 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CCZ1BP86790 482 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CCZ1P86791 482 aaPredicted RBP13.19□□□□□ -0.3
COL6A6-203ENST00000511332 ECT2LQ008S8 904 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 GNA12Q03113 381 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 ENPP2Q13822 863 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 PDK2Q15119 407 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CRY1Q16526 586 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 ZNF528Q3MIS6 628 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 ZFYVE27Q5T4F4 411 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 LRRC38Q5VT99 294 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 DAAM2Q86T65 1068 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 MAP7D3Q8IWC1 876 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 RHOT1Q8IXI2 618 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 OR52K2Q8NGK3 314 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
COL6A6-203ENST00000511332 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms