RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLC6A4P31645 630 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 CD70P32970 193 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 PSEN1P49768 467 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 ZNF445P59923 1031 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 EFEMP1Q12805 493 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 DHX8Q14562 1220 aaKnown RBP11.2□□□□□ -0.62
SNF8-207ENST00000509995 ZNF542PQ5EBM4 170 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.2□□□□□ -0.62
SNF8-207ENST00000509995 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 HEATR4Q86WZ0 1026 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 TNIP3Q96KP6 325 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 MRGPRX3Q96LB0 322 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 FOXP3Q9BZS1 431 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 PREBQ9HCU5 417 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 DONSONQ9NYP3 566 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 CLIC5Q9NZA1 410 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 PCDHA5Q9Y5H7 936 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 CSNK1G3Q9Y6M4 447 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 ZNF106Q9H2Y7 1883 aaKnown RBP11.2□□□□□ -0.62
SNF8-207ENST00000509995 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
SNF8-207ENST00000509995 EDDM13A0A1B0GTR0 161 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.19□□□□□ -0.62
SNF8-207ENST00000509995 HHLA1C9JL84 531 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 SLC7A4O43246 635 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 IL1BP01584 269 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 ITIH1P19827 911 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 CD82P27701 267 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 MZF1P28698 734 aaPredicted RBP11.19□□□□□ -0.62
SNF8-207ENST00000509995 CCKBRP32239 447 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 DEFB133Q30KQ1 61 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 TRAPPC11Q7Z392 1133 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 FAM114A1Q8IWE2 563 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 KDM1BQ8NB78 822 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 SLC2A14Q8TDB8 520 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 JAKMIP2Q96AA8 810 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 TTC17Q96AE7 1141 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 STRA6Q9BX79 667 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 SMYD3Q9H7B4 428 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 LOXL2Q9Y4K0 774 aa11.19□□□□□ -0.62
SNF8-207ENST00000509995 CCDC168Q8NDH2 2452 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 ITIH6Q6UXX5 1313 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 A0A1B0GTL3 188 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 TTC34A8MYJ7 566 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 H3BM21 787 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 SLC31A1O15431 190 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 REC8O95072 547 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
SNF8-207ENST00000509995 ASLP04424 464 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 FAM200BP0CF97 657 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 NME1P15531 152 aaKnown RBP11.18□□□□□ -0.62
SNF8-207ENST00000509995 PRLRP16471 622 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 CSKP41240 450 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 RPIAP49247 311 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 TOB1P50616 345 aaPredicted RBP11.18□□□□□ -0.62
SNF8-207ENST00000509995 SGSHP51688 502 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 METAP1P53582 386 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 ELAVL3Q14576 367 aaKnown RBP11.18□□□□□ -0.62
SNF8-207ENST00000509995 CLEC20AQ6ZU45 233 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 CCDC186Q7Z3E2 898 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 SFR1Q86XK3 245 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 WDR49Q8IV35 697 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 SLC35F3Q8IY50 421 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 STK40Q8N2I9 435 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 GPD1LQ8N335 351 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 PLD4Q96BZ4 506 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 TMA16Q96EY4 203 aaKnown RBP11.18□□□□□ -0.62
SNF8-207ENST00000509995 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 BOCQ9BWV1 1114 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 SLC4A5Q9BY07 1137 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 PCIF1Q9H4Z3 704 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 FZD3Q9NPG1 666 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
SNF8-207ENST00000509995 C9orf172C9J069 976 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 TPP1O14773 563 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 AQP9O43315 295 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 STAU1O95793 577 aaKnown RBP11.17□□□□□ -0.62
SNF8-207ENST00000509995 CSF2P04141 144 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 ETV5P41161 510 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 SURF1Q15526 300 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 L1TD1Q5T7N2 865 aaKnown RBP11.17□□□□□ -0.62
SNF8-207ENST00000509995 AGBL4Q5VU57 503 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 GCNT7Q6ZNI0 430 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 ABI3BPQ7Z7G0 1075 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 ACOT1Q86TX2 421 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 JPH3Q8WXH2 748 aaPredicted RBP11.17□□□□□ -0.62
SNF8-207ENST00000509995 GLMNQ92990 594 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 USP7Q93009 1102 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 TMEM74Q96NL1 305 aa11.17□□□□□ -0.62
SNF8-207ENST00000509995 ACCSQ96QU6 501 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms