RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 SNX11Q9Y5W9 270 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
KDM3B-206ENST00000509468 TMEM131Q92545 1883 aa13.02□□□□□ -0.32
KDM3B-206ENST00000509468 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 A0A1W2PPC4 97 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 M0QYT0 321 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 CLDN11O75508 207 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 GRAP2O75791 330 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 F9P00740 461 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FTH1P19P0C7X4 201 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 CCR5P51681 352 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 APBA1Q02410 837 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 NME3Q13232 169 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FBXL22Q6P050 247 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 SLC26A9Q7LBE3 791 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FAM71AQ8IYT1 594 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FEM1AQ9BSK4 669 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 ACE2Q9BYF1 805 aaPredicted RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 KDM4CQ9H3R0 1056 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 CLSTN2Q9H4D0 955 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 SIX2Q9NPC8 291 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 COX16Q9P0S2 106 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 SLC25A13Q9UJS0 675 aa13.02□□□□□ -0.33
KDM3B-206ENST00000509468 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.33
KDM3B-206ENST00000509468 A0A1W2PP55 124 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 VILLO15195 856 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 PAGE1O75459 146 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 DAB1O75553 588 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 IL1BP01584 269 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 ERBB2P04626 1255 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 PDGFRAP16234 1089 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
KDM3B-206ENST00000509468 CTSKP43235 329 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 ACCSLQ4AC99 568 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 FAM46CQ5VWP2 391 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 PNPLA1Q8N8W4 532 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 OR14C36Q8NHC7 312 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 ORAI3Q9BRQ5 295 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
KDM3B-206ENST00000509468 VANGL2Q9ULK5 521 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 STAP1Q9ULZ2 295 aa13.01□□□□□ -0.33
KDM3B-206ENST00000509468 NYNRINQ9P2P1 1898 aaKnown RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 KCNK3O14649 394 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 ZNF18P17022 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 CD38P28907 300 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 GRK6P43250 576 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 PSMD8P48556 350 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 CXCR3P49682 368 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 CCT8P50990 548 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 CDH4P55283 916 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 RNASE9P60153 205 aaKnown RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 KRT83P78385 493 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 DRAP1Q14919 205 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 INAVAQ3KP66 663 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 C5orf22Q49AR2 442 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 SLC45A4Q5BKX6 768 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 LRRC31Q6UY01 552 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 ERICH1Q86X53 443 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 MSANTD4Q8NCY6 345 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 BAHD1Q8TBE0 780 aaPredicted RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 ZCCHC14Q8WYQ9 949 aaKnown RBP13□□□□□ -0.33
KDM3B-206ENST00000509468 OR8D1Q8WZ84 308 aa13□□□□□ -0.33
KDM3B-206ENST00000509468 C1orf74Q96LT6 269 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms