RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FOXC1Q12948 553 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 TTC39BQ5VTQ0 682 aaPredicted RBP14.72□□□□□ -0.05
RAB28-205ENST00000508274 NAA35Q5VZE5 725 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 ERICH1Q86X53 443 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 ZDHHC17Q8IUH5 632 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
RAB28-205ENST00000508274 CPA5Q8WXQ8 436 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 CAMK1GQ96NX5 476 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 TBCBQ99426 244 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 TKTL2Q9H0I9 626 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 SIK2Q9H0K1 926 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 PABPC3Q9H361 631 aaKnown RBP14.72□□□□□ -0.05
RAB28-205ENST00000508274 IL21RQ9HBE5 538 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 NLRC4Q9NPP4 1024 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 DNAAF2Q9NVR5 837 aaKnown RBP14.72□□□□□ -0.05
RAB28-205ENST00000508274 DOCK4Q8N1I0 1966 aa14.72□□□□□ -0.05
RAB28-205ENST00000508274 A0A1W2PP55 124 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 GOLGA8SH3BPF8 625 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 CNTN5O94779 1100 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 FAM193AP78312 1265 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 SHC2P98077 582 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 ARID5BQ14865 1188 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 CST6Q15828 149 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 RNF219Q5W0B1 726 aaPredicted RBP14.71□□□□□ -0.05
RAB28-205ENST00000508274 LAYNQ6UX15 382 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 KDM1BQ8NB78 822 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 GANCQ8TET4 914 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 PTPRN2Q92932 1015 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 NT5C3BQ969T7 300 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 BIRC7Q96CA5 298 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 ALG14Q96F25 216 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 PCED1AQ9H1Q7 454 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 FBXL12Q9NXK8 326 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 ARHGEF38Q9NXL2 777 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 NOCTQ9UK39 431 aaKnown RBP14.71□□□□□ -0.05
RAB28-205ENST00000508274 SIK3Q9Y2K2 1263 aa14.71□□□□□ -0.05
RAB28-205ENST00000508274 CACNA1BQ00975 2339 aa14.71□□□□□ -0.06
RAB28-205ENST00000508274 AKAP13Q12802 2813 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 EDDM13A0A1B0GTR0 161 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 FAM47DPA6NHR8 397 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 FSBPO95073 299 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
RAB28-205ENST00000508274 PSMD8P48556 350 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 CSNK1EP49674 416 aaKnown RBP14.7□□□□□ -0.06
RAB28-205ENST00000508274 CXCR3P49682 368 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 PLK1P53350 603 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 JAM2P57087 298 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 DEUP1Q05D60 604 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 SLC12A1Q13621 1099 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 CFAP57Q96MR6 1250 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 FAM129BQ96TA1 746 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 SLC32A1Q9H598 525 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 WDCPQ9H6R7 721 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 RRN3Q9NYV6 651 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 STAP1Q9ULZ2 295 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 WASF3Q9UPY6 502 aa14.7□□□□□ -0.06
RAB28-205ENST00000508274 KMT2BQ9UMN6 2715 aaPredicted RBP14.7□□□□□ -0.06
RAB28-205ENST00000508274 A0A1B0GVT2 93 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 TARSL2A2RTX5 802 aaKnown RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 UPK3BL1B0FP48 263 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 UPK3BL2E5RIL1 263 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SH3BP5O60239 455 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 RNASEH1O60930 286 aaKnown RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 IGHV4-34P06331 123 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 CHRNB2P17787 502 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SCNN1AP37088 669 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 METAP1P53582 386 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 COPB1P53618 953 aaKnown RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 FMO1Q01740 532 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SLC25A52Q3SY17 297 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 C5orf22Q49AR2 442 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 ALFQ53S48 1182 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 FKBP15Q5T1M5 1219 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SASS6Q6UVJ0 657 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 USP30Q70CQ3 517 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 PHLDB2Q86SQ0 1253 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 ZNF683Q8IZ20 524 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 AADATQ8N5Z0 425 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 FRS2Q8WU20 508 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 GAREM1Q9H706 876 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SGK2Q9HBY8 427 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 METTL5Q9NRN9 209 aaKnown RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 ANO10Q9NW15 660 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 SCML1Q9UN30 329 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 NCKAP1Q9Y2A7 1128 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 FNDC3AQ9Y2H6 1198 aaKnown RBP14.69□□□□□ -0.06
RAB28-205ENST00000508274 OR51B4Q9Y5P0 310 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 USP24Q9UPU5 2620 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 DOCK9Q9BZ29 2069 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 CABIN1Q9Y6J0 2220 aa14.69□□□□□ -0.06
RAB28-205ENST00000508274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.68□□□□□ -0.06
RAB28-205ENST00000508274 TPM2P07951 284 aa14.68□□□□□ -0.06
RAB28-205ENST00000508274 SLC8A1P32418 973 aa14.68□□□□□ -0.06
RAB28-205ENST00000508274 SOX5P35711 763 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms