RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 POU3F3P20264 500 aaPredicted RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 NR1H3Q13133 447 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 MTA1Q13330 715 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 TFDP2Q14188 446 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 PDK2Q15119 407 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 CA9Q16790 459 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 CTC1Q2NKJ3 1217 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 C1orf228Q6PIY5 440 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 SRLQ86TD4 932 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 CCNYQ8ND76 341 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 UBLCP1Q8WVY7 318 aaPredicted RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 ZFYVE19Q96K21 471 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 MYADMQ96S97 322 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 KLF16Q9BXK1 252 aaPredicted RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 CREB1P16220 341 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 SLC7A9P82251 487 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 ZNF177Q13360 481 aaPredicted RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 SMAD4Q13485 552 aaKnown RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 MPP2Q14168 576 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 SPRED3Q2MJR0 410 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
PROM1-207ENST00000508167 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 TBC1D31Q96DN5 1066 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 SNF8Q96H20 258 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 BBS2Q9BXC9 721 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 NINJ2Q9NZG7 142 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
PROM1-207ENST00000508167 LAMP2P13473 410 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 GOT1P17174 413 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 ITIH2P19823 946 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 TACR2P21452 398 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 AMPD1P23109 780 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 GDI1P31150 447 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 SEC24CP53992 1094 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 COPS2P61201 443 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 RING1Q06587 406 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 KCNC3Q14003 757 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 ADGRF1Q5T601 910 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 ATL2Q8NHH9 583 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 MAGEB5Q9BZ81 275 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 EPN3Q9H201 632 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 AGO1Q9UL18 857 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 FZD10Q9ULW2 581 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 CST8O60676 142 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 TBL1XO60907 577 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 TJP3O95049 919 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 ITGAVP06756 1048 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 PFKLP17858 780 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 KDELR1P24390 212 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 CCDC105Q8IYK2 499 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 FERMT1Q9BQL6 677 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 CCDC134Q9H6E4 229 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 DRG1Q9Y295 367 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 APOL1O14791 398 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 LRIG2O94898 1065 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 PECAM1P16284 738 aaPredicted RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 AIF1P55008 147 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 FASTKD3Q14CZ7 662 aaKnown RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 NAT16Q8N8M0 369 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 CSGALNACT1Q8TDX6 532 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 CENPIQ92674 756 aaPredicted RBP11.29□□□□□ -0.6
PROM1-207ENST00000508167 CTNNAL1Q9UBT7 734 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 TTLL3Q9Y4R7 772 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 HS3ST4Q9Y661 456 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 MYLKQ15746 1914 aa11.29□□□□□ -0.6
PROM1-207ENST00000508167 H7C0C1 242 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 DFFAO00273 331 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 OR1E1P30953 314 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 ATP5OP48047 213 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 EIF3BP55884 814 aaKnown RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 TFDP3Q5H9I0 405 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 TANGO2Q6ICL3 276 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 GSTA5Q7RTV2 222 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
PROM1-207ENST00000508167 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
PROM1-207ENST00000508167 PGAP3Q96FM1 320 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms