RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PSAPP07602 524 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 MCF2P10911 925 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 HNRNPLP14866 589 aaKnown RBP eCLIP7.79□□□□□ -1.162e-9■■■□□ 17.6
NEDD9-208ENST00000504387 MAGP20916 626 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 C21orf59P57076 290 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PHEXP78562 749 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 RELAQ04206 551 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 DMPKQ09013 629 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 MAPK11Q15759 364 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 EGFLAMQ63HQ2 1017 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM53Q6P2H8 277 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 DLK2Q6UY11 383 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PYROXD2Q8N2H3 581 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 C7orf31Q8N865 590 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC97Q96F63 343 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 CPB2Q96IY4 423 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 MPHOSPH6Q99547 160 aaKnown RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 SERPINI1Q99574 410 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 GTSE1Q9NYZ3 720 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 SLC39A10Q9ULF5 831 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 DENRO43583 198 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 NDUFB5O43674 189 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ME2P23368 584 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 HOXD12P35452 270 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ACTR2P61160 394 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 KRT76Q01546 638 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 EMC2Q15006 297 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 STILQ15468 1287 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TGFBIQ15582 683 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 AMHR2Q16671 573 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ZIK1Q3SY52 487 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 FSCBQ5H9T9 825 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PACS1Q6VY07 963 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM192Q8IY95 271 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 DNAAF3Q8N9W5 541 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TRAPPC12Q8WVT3 735 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 NDRG1Q92597 394 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 SIGLEC10Q96LC7 697 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 EBNA1BP2Q99848 306 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 OSBPL6Q9BZF3 934 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TASP1Q9H6P5 420 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TIMMDC1Q9NPL8 285 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PAK5Q9P286 719 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 STK39Q9UEW8 545 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 RIMS3Q9UJD0 308 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TLL2Q9Y6L7 1015 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 MICAL3Q7RTP6 2002 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 NEMP2A6NFY4 417 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 C1QAP02745 245 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GSTT2P0CG29 244 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GSTT2BP0CG30 244 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CCND2P30279 289 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GABRB2P47870 512 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 JAK3P52333 1124 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 SH3BGRP55822 239 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ESRRGP62508 458 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CNTN2Q02246 1040 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 NOMO1Q15155 1222 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 DGKDQ16760 1214 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 SPDYE2Q495Y8 402 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TRNP1Q6NT89 227 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 B3GNT9Q6UX72 402 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 STRA8Q7Z7C7 330 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ADGRG6Q86SQ4 1221 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 HERC6Q8IVU3 1022 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 AHI1Q8N157 1196 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 OR9I1Q8NGQ6 314 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PCDH19Q8TAB3 1148 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 KBTBD7Q8WVZ9 684 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 FBXL20Q96IG2 436 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 VCPIP1Q96JH7 1222 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PPP1R10Q96QC0 940 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 HEPHQ9BQS7 1158 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 MTG1Q9BT17 334 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 POLR1BQ9H9Y6 1135 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PCDH18Q9HCL0 1135 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 PXMP2Q9NR77 195 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TBC1D23Q9NUY8 699 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 C6orf203Q9P0P8 240 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 THEGQ9P2T0 379 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 AP4S1Q9Y587 144 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GMEB1Q9Y692 573 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 E7ENX8 843 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 APOL1O14791 398 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 VAPBO95292 243 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 H6PDO95479 791 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 POLR2BP30876 1174 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 NKX2-5P52952 324 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 TBCCQ15814 346 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ARL13AQ5H913 290 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-208ENST00000504387 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF362Q5T0B9 420 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms