RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 DPYSQ14117 519 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 FUT11Q495W5 492 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF569Q5MCW4 686 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 MFSD7Q6UXD7 560 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 CCDC117Q8IWD4 279 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 TP53INP2Q8IXH6 220 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 SYCE1Q8N0S2 351 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF687Q8N1G0 1237 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 CCDC33Q8N5R6 958 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 RTL3Q8N8U3 475 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 TERB1Q8NA31 727 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 OR7D4Q8NG98 312 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 PCDH19Q8TAB3 1148 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 FAM71BQ8TC56 605 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 ALG3Q92685 438 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 SHDQ96IW2 340 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 CELF6Q96J87 481 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 SLC2A11Q9BYW1 496 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 TMEM248Q9NWD8 314 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 DDX56Q9NY93 547 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 KIAA1522Q9P206 1035 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 HCN2Q9UL51 889 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 PI15O43692 258 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 KRT10P13645 584 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 GLDCP23378 1020 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ACVRL1P37023 503 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 EIF2DP41214 584 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 GRIA2P42262 883 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 HCAR3P49019 387 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 PEX5P50542 639 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 FZD5Q13467 585 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 PDK2Q15119 407 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ODF2Q5BJF6 829 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ANKRD20A8PQ5CZ79 823 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 PITRM1Q5JRX3 1037 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 KAZNQ674X7 775 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ADIPOR2Q86V24 386 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 KATNAL2Q8IYT4 538 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 SLC35F6Q8N357 371 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 NPWQ8N729 165 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 CYB5D2Q8WUJ1 264 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ERLEC1Q96DZ1 483 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 ALG14Q96F25 216 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 MSANTD3Q96H12 275 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 CIPCQ9C0C6 399 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 KLC2Q9H0B6 622 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 LMAN1LQ9HAT1 526 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 POLR3BQ9NW08 1133 aaPredicted RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 TBC1D30Q9Y2I9 924 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 SLC27A6Q9Y2P4 619 aa13.62□□□□□ -0.23
PDLIM7-212ENST00000504380 WASH4PA8MWX3 477 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 DCLK1O15075 740 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 FGF10O15520 208 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 SNAP91O60641 907 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 MAP3K6O95382 1288 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 DCNP07585 359 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 CHRNB1P11230 501 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 TIE1P35590 1138 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 WASP42768 502 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 DYNLT1P63172 113 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 GNA12Q03113 381 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 MEI1Q5TIA1 1274 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 MBLAC2Q68D91 279 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 LEKR1Q6ZMV7 388 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 Q6ZS52 159 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 KIAA0907Q7Z7F0 614 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 RFX6Q8HWS3 928 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 CCDC50Q8IVM0 306 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 MAP7D3Q8IWC1 876 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 PQLC3Q8N755 202 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 LRRN4Q8WUT4 740 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 HES6Q96HZ4 224 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 RNF157Q96PX1 679 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 ALS2CR12Q96Q35 445 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 ACOX2Q99424 681 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 PSMB7Q99436 277 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 HERPUD2Q9BSE4 406 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 FEM1AQ9BSK4 669 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 MUC3BQ9H195 1237 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 OR51B4Q9Y5P0 310 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
PDLIM7-212ENST00000504380 CCDC66A2RUB6 948 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ENC1O14682 589 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 RNF40O75150 1001 aa13.6□□□□□ -0.23
PDLIM7-212ENST00000504380 ZRANB2O95218 330 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms