RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 BDNFP23560 247 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 SERPINH1P50454 418 aaKnown RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 GLIS3Q8NEA6 775 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 PGLYRP2Q96PD5 576 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 SLIT3O75094 1523 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 LIASO43766 372 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 LDLRP01130 860 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 GSTM1P09488 218 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 ITGB6P18564 788 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 PCBP1Q15365 356 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 SAMD4BQ5PRF9 694 aaKnown RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 EID3Q8N140 333 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 STK40Q8N2I9 435 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 LNX1Q8TBB1 728 aaPredicted RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 REPS1Q96D71 796 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 OSGEPL1Q9H4B0 414 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 PLSCR1O15162 318 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 PTPN3P26045 913 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 C1DQ13901 141 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 PCID2Q5JVF3 399 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 TCHHL1Q5QJ38 904 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SEPHS2Q99611 448 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 UGT2B28Q9BY64 529 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 LRCH1Q9Y2L9 728 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 CAMTA1Q9Y6Y1 1673 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM220BPB1ANY3 271 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SEC22BO75396 215 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ATN1P54259 1190 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 IL5RAQ01344 420 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ARHGAP17Q68EM7 881 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MTSS1LQ765P7 747 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SNX32Q86XE0 403 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF614Q8N883 585 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 TMEM237Q96Q45 408 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 PIF1Q9H611 641 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SH3BP4Q9P0V3 963 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 BTN3A1O00481 513 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 INPP4BO15327 924 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ABHD2P08910 425 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 CYP2A6P11509 494 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ETS1P14921 441 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 BCL2L1Q07817 233 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MFSD4BQ5TF39 518 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 TRMT11Q7Z4G4 463 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SYTL1Q8IYJ3 562 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MREGQ8N565 214 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 CKAP2Q8WWK9 683 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MED8Q96G25 268 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ATXN3LQ9H3M9 355 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 LRRC19Q9H756 370 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SORCS3Q9UPU3 1222 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MEI4A8MW99 385 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 MAFO75444 373 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 PDE5AO76074 875 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ZSCAN5DPP0CG00 497 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 FRG1Q14331 258 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 NECAB2Q7Z6G3 386 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 CYP4Z2PQ8N1L4 340 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ALLCQ8N6M5 410 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 ENOPH1Q9UHY7 261 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 KLHL20Q9Y2M5 609 aa16.82■□□□□ 0.28
PCDHA1-203ENST00000504120 SRRM3A6NNA2 597 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 DCXO43602 365 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 PPIL2Q13356 520 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 NEPROQ6NW34 567 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 PHF13Q86YI8 300 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 OR6Y1Q8NGX8 325 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 STARD8Q92502 1023 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 SHC3Q92529 594 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 MTERF3Q96E29 417 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 WDR18Q9BV38 432 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 TRPC4Q9UBN4 977 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 OR12D3Q9UGF7 316 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 RAG1P15918 1043 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 WEE1P30291 646 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 RPA3P35244 121 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 MLH1P40692 756 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 DRG2P55039 364 aaKnown RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 DDR1Q08345 913 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ARMC12Q5T9G4 340 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ZCCHC23Q6ZST2 131 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 SMPD4Q9NXE4 827 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 STMN3Q9NZ72 180 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 RGS14O43566 566 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 SMNDC1O75940 238 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 HPGDP15428 266 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 PLCL1Q15111 1095 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 CEP78Q5JTW2 689 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 POU5F2Q8N7G0 328 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 BAP1Q92560 729 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 ARMC7Q9H6L4 198 aa16.81■□□□□ 0.28
PCDHA1-203ENST00000504120 SYBUQ9NX95 663 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms