RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ZBTB9Q96C00 473 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 FMO2Q99518 471 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ZYG11BQ9C0D3 744 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 LRRC4CQ9HCJ2 640 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 ASAH2Q9NR71 780 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 TMEM248Q9NWD8 314 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM53CQ9NYF3 392 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CDH22Q9UJ99 828 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 HPCAL4Q9UM19 191 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CCL26Q9Y258 94 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 RAD54BQ9Y620 910 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 CPQQ9Y646 472 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 MIA3Q5JRA6 1907 aa7.09□□□□□ -1.27
TOPBP1-203ENST00000503464 A0A0A0MRY4 1105 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 AGPSO00116 658 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 KCNK1O00180 336 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 TRDMT1O14717 391 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 MAFKO60675 156 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PRAMEF12O95522 483 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 RHOP08100 348 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 HNRNPA1P09651 372 aaKnown RBP eCLIP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 HDCP19113 662 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PTPN3P26045 913 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 CDC25CP30307 473 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 STIP1P31948 543 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 SERPINB6P35237 376 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 HSD17B3P37058 310 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 MAGEA6P43360 314 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 TNNT3P45378 269 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 RPS24P62847 133 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 SMAD3P84022 425 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 AP1B1Q10567 949 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PDK1Q15118 436 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 MAP9Q49MG5 647 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 MSS51Q4VC12 460 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PABPC1LQ4VXU2 614 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 SYCP2LQ5T4T6 812 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 RTL10Q7L3V2 364 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 GRASPQ7Z6J2 395 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 TDHQ8IZJ6 230 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 LGI2Q8N0V4 545 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ZNF567Q8N184 647 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 AGGF1Q8N302 714 aaeCLIP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ZCCHC9Q8N567 271 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 CNTD1Q8N815 330 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 CCHCR1Q8TD31 782 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 HMCESQ96FZ2 354 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ZSWIM3Q96MP5 696 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 SPATA13Q96N96 652 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 RPRD1AQ96P16 312 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 TSGA13Q96PP4 275 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 PRKD2Q9BZL6 878 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 FAM129AQ9BZQ8 928 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 NACA2Q9H009 215 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 LMAN2LQ9H0V9 348 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ATXN3LQ9H3M9 355 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 OCEL1Q9H607 264 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 CATSPERBQ9H7T0 1116 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 DNAJC17Q9NVM6 304 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ZDHHC7Q9NXF8 308 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 MSRAQ9UJ68 235 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ANAPC5Q9UJX4 755 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 TPX2Q9ULW0 747 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ZFP37Q9Y6Q3 630 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 KIAA1549LQ6ZVL6 1849 aa7.08□□□□□ -1.28
TOPBP1-203ENST00000503464 ANKRD36A6QL64 1941 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 CLUHO75153 1309 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 PRRC2BQ5JSZ5 2229 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 TRAV19A0A0A6YYK7 116 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 CCDC195A0A1B0GUA6 201 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 RASA4BC9J798 803 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 F5H423 210 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 F5H5T6 163 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 DFFAO00273 331 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 LEFTY2O00292 366 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 NCAM2O15394 837 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 LINC01565O15544 149 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 RASA4O43374 803 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 TSPAN3O60637 253 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 BANF1O75531 89 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 LATS1O95835 1130 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 CEBPBP17676 345 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 PTPN2P17706 415 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 PFKLP17858 780 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 MX2P20592 715 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 HOXD9P28356 352 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 ACVRL1P37023 503 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 SLC11A2P49281 568 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 HARS2P49590 506 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 NUMBP49757 651 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 PAPOLAP51003 745 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 IFI35P80217 286 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 DHX9Q08211 1270 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 HYAL1Q12794 435 aa7.07□□□□□ -1.28
TOPBP1-203ENST00000503464 CALCOCO2Q13137 446 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms