RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 MAGEH1Q9H213 219 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 NSUN3Q9H649 340 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 KIF9Q9HAQ2 790 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 EIF2B3Q9NR50 452 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 IGSF9Q9P2J2 1179 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 TBC1D14Q9P2M4 693 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 DNMT3BQ9UBC3 853 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 AGO1Q9UL18 857 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 SNX10Q9Y5X0 201 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 MKI67P46013 3256 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ILVBLA1L0T0 632 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 RNF103O00237 685 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 DFFAO00273 331 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MAP2K7O14733 419 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 SLC9A3R1O14745 358 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 PER2O15055 1255 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MATN3O15232 486 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 RFPL2O75678 378 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 NEBLO76041 1014 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 CSPG5O95196 566 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 CYBBP04839 570 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ZSCAN5DPP0CG00 497 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 IRF1P10914 325 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 HOXB8P17481 243 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TPSB2P20231 275 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 GGCXP38435 758 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 NRIP1P48552 1158 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 RENBPP51606 427 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 EIF3BP55884 814 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 IFI35P80217 286 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 CBLBQ13191 982 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF177Q13360 481 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 HNRNPDQ14103 355 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 PRPSAP1Q14558 356 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 POLD3Q15054 466 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TPSAB1Q15661 275 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TEX44Q53QW1 395 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 PRSS36Q5K4E3 855 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ANKRD20A2Q5SQ80 823 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ANKRD20A1Q5TYW2 823 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ANKRD20A3Q5VUR7 823 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 CENPUQ71F23 418 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TRMT10CQ7L0Y3 403 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 PID1Q7Z2X4 250 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TMC3Q7Z5M5 1100 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 RBM23Q86U06 439 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ARHGAP12Q8IWW6 846 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 PDIK1LQ8N165 341 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 BBS5Q8N3I7 341 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 NAT8LQ8N9F0 302 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 HJURPQ8NCD3 748 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MCUQ8NE86 351 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 SHKBP1Q8TBC3 707 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 GDPD5Q8WTR4 605 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 SMG7Q92540 1137 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ZNF599Q96NL3 588 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 LGMNQ99538 433 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 HINFPQ9BQA5 517 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 FUT8Q9BYC5 575 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 ADAM7Q9H2U9 754 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 RAB6BQ9NRW1 208 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 GKN1Q9NS71 199 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 TDP1Q9NUW8 608 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 SMPD4Q9NXE4 827 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MPP6Q9NZW5 540 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 KLHL8Q9P2G9 620 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 MFHAS1Q9Y4C4 1052 aa8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-202ENST00000503338 CXorf51AA0A1B0GTR3 108 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 RASA4BC9J798 803 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 E7EVH7 732 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 LEFTY2O00292 366 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 RASA4O43374 803 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 MAFKO60675 156 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 KLKB1P03952 638 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 FAM153BP0C7A2 387 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 MLNP12872 115 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 CCNB1P14635 433 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 ETS1P14921 441 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 VAV1P15498 845 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TSHRP16473 764 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 PTPN3P26045 913 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 RGS19P49795 217 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 VASPP50552 380 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 PAPOLAP51003 745 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 PMS2P54278 862 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 TNK2Q07912 1038 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 IL10RBQ08334 325 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SERINC3Q13530 473 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 SEMA5AQ13591 1074 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 KCNC3Q14003 757 aa8.32□□□□□ -1.08
TOPBP1-202ENST00000503338 KCNJ11Q14654 390 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms