RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 PREBQ9HCU5 417 aa11.84□□□□□ -0.51
TNPO1-202ENST00000503084 DKK3Q9UBP4 350 aa11.84□□□□□ -0.51
TNPO1-202ENST00000503084 VPS4AQ9UN37 437 aa11.84□□□□□ -0.51
TNPO1-202ENST00000503084 LOXL2Q9Y4K0 774 aa11.84□□□□□ -0.51
TNPO1-202ENST00000503084 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
TNPO1-202ENST00000503084 A0A1B0GTL3 188 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 D6RAR5 112 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 NTN3O00634 580 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 SLC31A1O15431 190 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 PLRG1O43660 514 aaKnown RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 DDAH2O95865 285 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 LDHAP00338 332 aaKnown RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 IL1BP01584 269 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 FAM163BP0C2L3 166 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 NR1D1P20393 614 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 ETV5P41161 510 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 PRPHP41219 470 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 TOB1P50616 345 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 TRAPPC11Q7Z392 1133 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 SLC35F3Q8IY50 421 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 NAT6Q93015 286 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 IFT43Q96FT9 208 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 ABHD17AQ96GS6 310 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 STRADBQ9C0K7 418 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 PCIF1Q9H4Z3 704 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 NOL7Q9UMY1 257 aaKnown RBP11.83□□□□□ -0.52
TNPO1-202ENST00000503084 PCDHA5Q9Y5H7 936 aa11.83□□□□□ -0.52
TNPO1-202ENST00000503084 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
TNPO1-202ENST00000503084 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 A0A1W2PQC6 194 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 C9orf172C9J069 976 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 RALAP11233 206 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 PRF1P14222 555 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 GARTP22102 1010 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 SLC6A4P31645 630 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 CSKP41240 450 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 CLDN2P57739 230 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 MCM6Q14566 821 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 AGBL4Q5VU57 503 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 HEATR4Q86WZ0 1026 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 KLK6Q92876 244 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 TNIP3Q96KP6 325 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 STRA6Q9BX79 667 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 BLOC1S4Q9NUP1 217 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 FAM49BQ9NUQ9 324 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 MARCH2Q9P0N8 246 aa11.82□□□□□ -0.52
TNPO1-202ENST00000503084 SHANK1Q9Y566 2161 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 EDDM13A0A1B0GTR0 161 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 TARSL2A2RTX5 802 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 RIOK3O14730 519 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 SLC7A4O43246 635 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CST3P01034 146 aaPredicted RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 ME3Q16798 604 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 L1TD1Q5T7N2 865 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 SCARA5Q6ZMJ2 495 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 GCNT7Q6ZNI0 430 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CLEC20AQ6ZU45 233 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 TMPRSS9Q7Z410 1059 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 PTAR1Q7Z6K3 402 aaPredicted RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CBWD2Q8IUF1 395 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 WDR49Q8IV35 697 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 GPD1LQ8N335 351 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 ZNF276Q8N554 614 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 USP7Q93009 1102 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 TTC17Q96AE7 1141 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 PLD4Q96BZ4 506 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 LMLNQ96KR4 655 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CDK5RAP1Q96SZ6 601 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 BOCQ9BWV1 1114 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 DONSONQ9NYP3 566 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 HMGXB4Q9UGU5 601 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 SALL4Q9UJQ4 1053 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 INTS6Q9UL03 887 aaKnown RBP11.81□□□□□ -0.52
TNPO1-202ENST00000503084 EXOC7Q9UPT5 735 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 TP53TG5Q9Y2B4 290 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 KIF3AQ9Y496 699 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 CSNK1G3Q9Y6M4 447 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
TNPO1-202ENST00000503084 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.8□□□□□ -0.52
TNPO1-202ENST00000503084 AQP9O43315 295 aa11.8□□□□□ -0.52
TNPO1-202ENST00000503084 RNGTTO60942 597 aaKnown RBP11.8□□□□□ -0.52
TNPO1-202ENST00000503084 REC8O95072 547 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms