RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	LIMA1	Q9UHB6	759 aa	Known RBP	11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	STOML2	Q9UJZ1	356 aa		11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	CLEC4E	Q9ULY5	219 aa		11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	DOLK	Q9UPQ8	538 aa		11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	CFAP54	Q96N23	3096 aa		11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	ATXN2	Q99700	1313 aa	Known RBP	11.03	□□□□□ -0.64
CDK11A-222	ENST00000498810	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	MEI4	A8MW99	385 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	KCNU1	A8MYU2	1149 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	WASH3P	C4AMC7	463 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	LUC7L3	O95232	432 aa	Known RBP	11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	CAVIN2	O95810	425 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	SERPINC1	P01008	464 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	FYN	P06241	537 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	DES	P17661	470 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	HLA-F	P30511	346 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	NOS2	P35228	1153 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	P2RY2	P41231	377 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	DPP6	P42658	865 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	NSF	P46459	744 aa	Known RBP	11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF165	P49910	485 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	RPS24	P62847	133 aa	Known RBP	11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	DEUP1	Q05D60	604 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	SF3A2	Q15428	464 aa	Known RBP	11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	DBN1	Q16643	649 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	MS4A13	Q5J8X5	152 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	MPP7	Q5T2T1	576 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	MBLAC2	Q68D91	279 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	NADSYN1	Q6IA69	706 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	KIAA1211L	Q6NV74	962 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	TRIM72	Q6ZMU5	477 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	TMEFF1	Q8IYR6	380 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	RGL4	Q8IZJ4	473 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	CFAP52	Q8N1V2	620 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	SLC20A1	Q8WUM9	679 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	CPA5	Q8WXQ8	436 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	RMDN1	Q96DB5	314 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	SLC2A13	Q96QE2	648 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	NAA15	Q9BXJ9	866 aa	Known RBP	11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	FBXO10	Q9UK96	956 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	GPR179	Q6PRD1	2367 aa		11.02	□□□□□ -0.65
CDK11A-222	ENST00000498810	ADAMTS9	Q9P2N4	1935 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810		A0A1W2PQF6	199 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SYCE3	A1L190	88 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	ANKRD62	A6NC57	917 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	GOLGA6L19	H0YKK7	550 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	ASL	P04424	464 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	CFI	P05156	583 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	HLA-E	P13747	358 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	PRKCH	P24723	683 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	CD70	P32970	193 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	NNMT	P40261	264 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	MATK	P42679	507 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	NOMO3	P69849	1222 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	PITX1	P78337	314 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	CDR2	Q01850	454 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	FUT11	Q495W5	492 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	TTC31	Q49AM3	519 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF385C	Q66K41	422 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	MMS22L	Q6ZRQ5	1243 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	CIR1	Q86X95	450 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	WDTC1	Q8N5D0	677 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	DEFB119	Q8N690	84 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF366	Q8N895	744 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	GANC	Q8TET4	914 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SIPA1	Q96FS4	1042 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SLC39A13	Q96H72	371 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	C11orf70	Q9BRQ4	267 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	EDEM2	Q9BV94	578 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	NUSAP1	Q9BXS6	441 aa	Known RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SIK2	Q9H0K1	926 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SLC6A17	Q9H1V8	727 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	SMOC1	Q9H4F8	434 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	WDCP	Q9H6R7	721 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	METTL5	Q9NRN9	209 aa	Known RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	XPO7	Q9UIA9	1087 aa	Known RBP	11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	DMD	P11532	3685 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	FRYL	O94915	3013 aa		11.01	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF292	O60281	2723 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	PI4KA	P42356	2102 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	TP53BP1	Q12888	1972 aa	Predicted RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810		A0A1B0GVM2	712 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	BCLAF3	A2AJT9	711 aa	Known RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	TCAF2	A6NFQ2	919 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	KHNYN	O15037	678 aa	Known RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	RNASEH1	O60930	286 aa	Known RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	F9	P00740	461 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	DNTT	P04053	509 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	DLD	P09622	509 aa	Known RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF806	P0C7X5	589 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	ATP1A3	P13637	1013 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	ZNF18	P17022	549 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	CDH5	P33151	784 aa	Predicted RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	SOX11	P35716	441 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	CSK	P41240	450 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	NUMB	P49757	651 aa		11	□□□□□ -0.65
CDK11A-222	ENST00000498810	ATXN3	P54252	364 aa	Predicted RBP	11	□□□□□ -0.65
CDK11A-222	ENST00000498810	OXCT1	P55809	520 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms