RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
HSPG2-213ENST00000498495 IGLV3-10A0A075B6K4 115 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 RHOCP08134 193 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 PSMA2P25787 234 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 OR1E1P30953 314 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 CTSOP43234 321 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 DHPSP49366 369 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 COPAP53621 1224 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 KRT83P78385 493 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 VSTM4Q8IW00 320 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 ALG14Q96F25 216 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 MYO19Q96H55 970 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 MRGPRX3Q96LB0 322 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 SLCO3A1Q9UIG8 710 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 MBD1Q9UIS9 605 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-213ENST00000498495 SLC25A13Q9UJS0 675 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 VPS28Q9UK41 221 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 CYP8B1Q9UNU6 501 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 PCDHGA5Q9Y5G8 931 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
HSPG2-213ENST00000498495 A0A087X0T9 212 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 IGHV1OR15-9A0A0B4J2B8 117 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TMEM191CA6NGB0 347 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TTC34A8MYJ7 566 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 AP5Z1O43299 807 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 LRP3O75074 770 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 NDUFS2O75306 463 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 RNF8O76064 485 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 EPN2O95208 641 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 FAM228BP0C875 321 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 HNRNPH3P31942 346 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 OGDHQ02218 1023 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 RPL6Q02878 288 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 CREB5Q02930 508 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 HNRNPA1L2Q32P51 320 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 ACCSLQ4AC99 568 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 EFHC2Q5JST6 749 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 RWDD4Q6NW29 188 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TFAP2DQ7Z6R9 452 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 TMEFF1Q8IYR6 380 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 DEFB119Q8N690 84 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 MAGEB5Q9BZ81 275 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 FBRSQ9HAH7 460 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
HSPG2-213ENST00000498495 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 RNASEH1O60930 286 aaKnown RBP13.14□□□□□ -0.31
HSPG2-213ENST00000498495 SIN3BO75182 1162 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 LRIG2O94898 1065 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 DNTTP04053 509 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 TGM1P22735 817 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 CD6P30203 668 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 OXTRP30559 389 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 L1CAMP32004 1257 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
HSPG2-213ENST00000498495 STK19P49842 368 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-213ENST00000498495 TPMTP51580 245 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 AIF1P55008 147 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 ARID5BQ14865 1188 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 CSRP2Q16527 193 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF783Q6ZMS7 281 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 SPON2Q9BUD6 331 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 C2orf49Q9BVC5 232 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-213ENST00000498495 DEF6Q9H4E7 631 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
HSPG2-213ENST00000498495 A0A0D9SEW6 157 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 FAM72CH0Y354 149 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 CREB3O43889 395 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF806P0C7X5 589 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 RHOQP17081 205 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 MPLP40238 635 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 RPS14P62263 151 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms