RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZBTB11O95625 1053 aaPredicted RBP4.29□□□□□ -1.72
SMC4-227ENST00000497984 FCGR1AP12314 374 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 CHRNB2P17787 502 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 CLCN5P51795 746 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 PMS2P54278 862 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 ZP1P60852 638 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 DSC1Q08554 894 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 DUSP6Q16828 381 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 ALG10Q5BKT4 473 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 ALG10BQ5I7T1 473 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 Q6ZSV7 163 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 RASGRP3Q8IV61 690 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 TTC8Q8TAM2 541 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 POLDIP3Q9BY77 421 aaKnown RBP4.29□□□□□ -1.72
SMC4-227ENST00000497984 ZNF304Q9HCX3 659 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 DTNAQ9Y4J8 743 aa4.29□□□□□ -1.72
SMC4-227ENST00000497984 TRBV5-7A0A0A0MS05 114 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 PNMA6EA0A0J9YXQ4 647 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 APOL1O14791 398 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 PRSS2P07478 247 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 ZNF12P17014 697 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 SLC16A2P36021 539 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 STT3AP46977 705 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 FOXL2P58012 376 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 TAS2R50P59544 299 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 SEC61A1P61619 476 aaKnown RBP4.28□□□□□ -1.72
SMC4-227ENST00000497984 TLE3Q04726 772 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 C8orf82Q6P1X6 216 aaPredicted RBP4.28□□□□□ -1.72
SMC4-227ENST00000497984 C14orf80Q86SX3 495 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 TIFAQ96CG3 184 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMC4-227ENST00000497984 CATSPERBQ9H7T0 1116 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 FBXO4Q9UKT5 387 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 CA14Q9ULX7 337 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 NOTCH3Q9UM47 2321 aa4.28□□□□□ -1.72
SMC4-227ENST00000497984 FAM234BA2RU67 622 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 C3orf70A6NLC5 250 aaPredicted RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 PEPDP12955 493 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 TNFSF8P32971 234 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 PRIM2P49643 509 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 ADPRHP54922 357 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 HILS1P60008 231 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 TMEM88Q6PEY1 159 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 ZNF367Q7RTV3 350 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 TTC30AQ86WT1 665 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 FAM217AQ8IXS0 508 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 WBP1Q96G27 269 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 EIF2AQ9BY44 585 aaKnown RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 FRMD8Q9BZ67 464 aaPredicted RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 B3GNT4Q9C0J1 378 aa4.27□□□□□ -1.73
SMC4-227ENST00000497984 MAGED2Q9UNF1 606 aaPredicted RBP4.27□□□□□ -1.73
SMC4-227ENST00000497984 CYP3A7-CYP3A51PA0A087WV96 503 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 PCDH17O14917 1159 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 CER1O95813 267 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 UMODP07911 640 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 TCEA1P23193 301 aaKnown RBP4.26□□□□□ -1.73
SMC4-227ENST00000497984 CYP3A7P24462 503 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 DLX5P56178 289 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 HNF4GQ14541 408 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 GRM4Q14833 912 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 ZNF718Q3SXZ3 478 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 TDRD12Q587J7 1177 aaKnown RBP4.26□□□□□ -1.73
SMC4-227ENST00000497984 ARL13AQ5H913 290 aaPredicted RBP4.26□□□□□ -1.73
SMC4-227ENST00000497984 ANKRD40Q6AI12 368 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 FBXL22Q6P050 247 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 ERAP2Q6P179 960 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 CREB3L2Q70SY1 520 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 BICD2Q8TD16 824 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 TMEM255BQ8WV15 326 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 DDX31Q9H8H2 851 aaKnown RBP4.26□□□□□ -1.73
SMC4-227ENST00000497984 HELLSQ9NRZ9 838 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 KLHL42Q9P2K6 505 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 WDR81Q562E7 1941 aa4.26□□□□□ -1.73
SMC4-227ENST00000497984 DENND3A2RUS2 1198 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 MCIDASD6RGH6 385 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 PPM1GO15355 546 aaPredicted RBP4.25□□□□□ -1.73
SMC4-227ENST00000497984 SLC16A5O15375 505 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 LIASO43766 372 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 NTSR2O95665 410 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 CYP3A4P08684 503 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 SLC5A1P13866 664 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 ITGB8P26012 769 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 CHRNA5P30532 468 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 POU5F1BQ06416 359 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 TRAF3Q13114 568 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 FSCBQ5H9T9 825 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 OTUD3Q5T2D3 398 aaPredicted RBP4.25□□□□□ -1.73
SMC4-227ENST00000497984 ATG9BQ674R7 924 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 CAMK1DQ8IU85 385 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 APOLD1Q96LR9 279 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 RAI2Q9Y5P3 530 aa4.25□□□□□ -1.73
SMC4-227ENST00000497984 MS4A18H0YCH9 400 aa4.24□□□□□ -1.73
SMC4-227ENST00000497984 STAT1P42224 750 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms