RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 ADAT2Q7Z6V5 191 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 CCAR2Q8N163 923 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 OMDQ99983 421 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 NDST4Q9H3R1 872 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 PCOLCE2Q9UKZ9 415 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 MSRB2Q9Y3D2 182 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 SNX11Q9Y5W9 270 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 DSPP15924 2871 aaKnown RBP13.36□□□□□ -0.27
FN1-226ENST00000496542 ITIH6Q6UXX5 1313 aa13.36□□□□□ -0.27
FN1-226ENST00000496542 TMEM8BA6NDV4 472 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 IGHV4-34P06331 123 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 SLC8A1P32418 973 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 IRAK1P51617 712 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 SLC6A3Q01959 620 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 SLC12A1Q13621 1099 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
FN1-226ENST00000496542 VWA3BQ502W6 1294 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 FBXL22Q6P050 247 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 SLC26A9Q7LBE3 791 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 RAB44Q7Z6P3 723 aaPredicted RBP13.35□□□□□ -0.27
FN1-226ENST00000496542 PNPLA1Q8N8W4 532 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 KDF1Q8NAX2 398 aaPredicted RBP13.35□□□□□ -0.27
FN1-226ENST00000496542 ZCCHC14Q8WYQ9 949 aaKnown RBP13.35□□□□□ -0.27
FN1-226ENST00000496542 IGSF8Q969P0 613 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 VANGL2Q9ULK5 521 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 DMXL2Q8TDJ6 3036 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 ZFHX4Q86UP3 3567 aa13.35□□□□□ -0.27
FN1-226ENST00000496542 KNTC1P50748 2209 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 M0QYT0 321 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 KCNK3O14649 394 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 FLRT2O43155 660 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 ADH1BP00325 375 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 IL1BP01584 269 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 VAV1P15498 845 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 NNMTP40261 264 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 GALCP54803 685 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 OXCT1P55809 520 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 BPIFB4P59827 614 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
FN1-226ENST00000496542 SULT2A1Q06520 285 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 ELAVL3Q14576 367 aaKnown RBP13.34□□□□□ -0.27
FN1-226ENST00000496542 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 CXorf57Q6NSI4 855 aaKnown RBP13.34□□□□□ -0.27
FN1-226ENST00000496542 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 FAM71AQ8IYT1 594 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 OR2T34Q8NGX1 318 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 PTPRN2Q92932 1015 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 SLC6A18Q96N87 628 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 FAM129BQ96TA1 746 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 ORAI3Q9BRQ5 295 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 FZD4Q9ULV1 537 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 APOBEC2Q9Y235 224 aaKnown RBP13.34□□□□□ -0.27
FN1-226ENST00000496542 PCDHGB2Q9Y5G2 931 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
FN1-226ENST00000496542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 A0A1W2PPC4 97 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 H0Y8X5 98 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 PAGE1O75459 146 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 NOS2P35228 1153 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 CTSKP43235 329 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 SULT1E1P49888 294 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 CCT8P50990 548 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 C21orf59P57076 290 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 IL9RQ01113 521 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 ZNF177Q13360 481 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 OTUD1Q5VV17 481 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 DPY19L2P1Q6NXN4 242 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■■□□□ 14
FN1-226ENST00000496542 C14orf80Q86SX3 495 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 SLCO6A1Q86UG4 719 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 TMEM35BQ8NCS4 154 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 ZNF397Q8NF99 534 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 OR14C36Q8NHC7 312 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 ADAMTS14Q8WXS8 1223 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 ACE2Q9BYF1 805 aaPredicted RBP13.33□□□□□ -0.28
FN1-226ENST00000496542 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 AASDHPPTQ9NRN7 309 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 PIGVQ9NUD9 493 aa13.33□□□□□ -0.28
FN1-226ENST00000496542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms