RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SGK2Q9HBY8 427 aa14.87□□□□□ -0.03
CXCL12-208ENST00000496375 TM9SF3Q9HD45 589 aa14.87□□□□□ -0.03
CXCL12-208ENST00000496375 CYTH4Q9UIA0 394 aa14.87□□□□□ -0.03
CXCL12-208ENST00000496375 NOCTQ9UK39 431 aaKnown RBP14.87□□□□□ -0.03
CXCL12-208ENST00000496375 LAMA5O15230 3695 aa14.87□□□□□ -0.03
CXCL12-208ENST00000496375 TMEM131Q92545 1883 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 SRRM3A6NNA2 597 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 LUC7L3O95232 432 aaKnown RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 USP8P40818 1118 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 STAT1P42224 750 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 CTSOP43234 321 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 UBASH3AP57075 661 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 TEAD4Q15561 434 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 PITRM1Q5JRX3 1037 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 RAP1GAP2Q684P5 730 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 GLRX5Q86SX6 157 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 TMEM110Q86TL2 294 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 CHSY1Q86X52 802 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 LGI2Q8N0V4 545 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 GANCQ8TET4 914 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 IQCDQ96DY2 449 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 SPAG5Q96R06 1193 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 OSGEPQ9NPF4 335 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 NLRC4Q9NPP4 1024 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 TJP2Q9UDY2 1190 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 ERVW-1Q9UQF0 538 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 APOBEC2Q9Y235 224 aaKnown RBP14.86□□□□□ -0.03
CXCL12-208ENST00000496375 NCKAP1Q9Y2A7 1128 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 PCDHGB2Q9Y5G2 931 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 SNX11Q9Y5W9 270 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 FAM208BQ5VWN6 2430 aa14.86□□□□□ -0.03
CXCL12-208ENST00000496375 MID1O15344 667 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 RNASEH1O60930 286 aaKnown RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 MOCS3O95396 460 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 TRUB2O95900 331 aaKnown RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 TACR2P21452 398 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 CD27P26842 260 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 GRIA4P48058 902 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 ZC3H12AQ5D1E8 599 aaKnown RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 SARM1Q6SZW1 724 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 LAYNQ6UX15 382 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 USP30Q70CQ3 517 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 NOP9Q86U38 636 aaKnown RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 SLCO6A1Q86UG4 719 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 WDTC1Q8N5D0 677 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 KDM1BQ8NB78 822 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 BTN2A3PQ96KV6 586 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 PCMTD1Q96MG8 357 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 FBXL12Q9NXK8 326 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 KIAA1522Q9P206 1035 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-208ENST00000496375 SERGEFQ9UGK8 458 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 SCML1Q9UN30 329 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 ANKRD6Q9Y2G4 727 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 CEP83Q9Y592 693 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 ITIH6Q6UXX5 1313 aa14.85□□□□□ -0.03
CXCL12-208ENST00000496375 A0A1W2PP55 124 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 A0A1W2PQJ5 194 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 FAM47DPA6NHR8 397 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 FLRT2O43155 660 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 LSM8O95777 96 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 IGLV3-25P01717 112 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 IGHV4-34P06331 123 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 SRPRAP08240 638 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 ECT2LQ008S8 904 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 PDCLQ13371 301 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 GSE1Q14687 1217 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 ARID5BQ14865 1188 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 TAF5Q15542 800 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 CST6Q15828 149 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 KIAA0895LQ68EN5 471 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 DBX2Q6ZNG2 339 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 ADAT2Q7Z6V5 191 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 MMAAQ8IVH4 418 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 APCDD1Q8J025 514 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 BAHD1Q8TBE0 780 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 ORAI3Q9BRQ5 295 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 XPO4Q9C0E2 1151 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 IFNKQ9P0W0 207 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 SLCO3A1Q9UIG8 710 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 DSPP15924 2871 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 PLXNA2O75051 1894 aa14.84□□□□□ -0.03
CXCL12-208ENST00000496375 NYNRINQ9P2P1 1898 aaKnown RBP14.84□□□□□ -0.03
CXCL12-208ENST00000496375 PKD1L2Q7Z442 2459 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 EDDM13A0A1B0GTR0 161 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 TARSL2A2RTX5 802 aaKnown RBP14.83□□□□□ -0.04
CXCL12-208ENST00000496375 F5H5T6 163 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 KCNK3O14649 394 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 CBFA2T2O43439 604 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 RNASEH2AO75792 299 aaKnown RBP14.83□□□□□ -0.04
CXCL12-208ENST00000496375 GFPT2O94808 682 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 TPM3P06753 285 aa14.83□□□□□ -0.04
CXCL12-208ENST00000496375 KRT9P35527 623 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms