RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 LRRC72A6NJI9 287 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 F8VZ95 297 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 MID1O15344 667 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 SH3BP5O60239 455 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 RNASEH2AO75792 299 aaKnown RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ADCY5O95622 1261 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CER1O95813 267 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 MMEP08473 750 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ZNF18P17022 549 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CD27P26842 260 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 SULT1E1P49888 294 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 GALCP54803 685 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CDH4P55283 916 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 KRT31Q15323 416 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 HLA-BQ31612 363 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 SLC25A52Q3SY17 297 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 XYLT1Q86Y38 959 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ANKRD20A12PQ8NF67 263 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 PIGVQ9NUD9 493 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 FANCLQ9NW38 375 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 ARHGEF38Q9NXL2 777 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 DAAM1Q9Y4D1 1078 aa13.12□□□□□ -0.31
PTPRF-214ENST00000496043 TPRP12270 2363 aaKnown RBP13.12□□□□□ -0.31
PTPRF-214ENST00000496043 A0A1B0GVT2 93 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 A0A1W2PP55 124 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 FAM47DPA6NHR8 397 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 GOLGA8SH3BPF8 625 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 TRIM16O95361 564 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ADH1BP00325 375 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 IL1BP01584 269 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ZNF883P0CG24 379 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 GOT1P17174 413 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 C5AR1P21730 350 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 STK19P49842 368 aaPredicted RBP13.11□□□□□ -0.31
PTPRF-214ENST00000496043 POLR2FP61218 127 aaKnown RBP13.11□□□□□ -0.31
PTPRF-214ENST00000496043 KRT83P78385 493 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 BNC1Q01954 994 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 CENPCQ03188 943 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
PTPRF-214ENST00000496043 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ST3GAL2Q16842 350 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ARCQ7LC44 396 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ALG14Q96F25 216 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 TBCBQ99426 244 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 GANQ9H2C0 597 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 FZD4Q9ULV1 537 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 ANKRD6Q9Y2G4 727 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 TBC1D30Q9Y2I9 924 aa13.11□□□□□ -0.31
PTPRF-214ENST00000496043 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 ATP9BO43861 1147 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 GFPT2O94808 682 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
PTPRF-214ENST00000496043 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
PTPRF-214ENST00000496043 SOX5P35711 763 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 STAT1P42224 750 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 GRIA4P48058 902 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 PSMD8P48556 350 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 NUMBP49757 651 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 NOMO3P69849 1222 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 FAM193AP78312 1265 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 CDR2Q01850 454 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
PTPRF-214ENST00000496043 DLG2Q15700 870 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 C2CD6Q53TS8 623 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
PTPRF-214ENST00000496043 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 DSG4Q86SJ6 1040 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 OR2T34Q8NGX1 318 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 OR8D1Q8WZ84 308 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
PTPRF-214ENST00000496043 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
PTPRF-214ENST00000496043 SPAG5Q96R06 1193 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms