RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 FBXO39Q8N4B4 442 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 SMARCD1Q96GM5 515 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 SYNDIG1Q9H7V2 258 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 NCKIPSDQ9NZQ3 722 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 CLEC4EQ9ULY5 219 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 DMTF1Q9Y222 760 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 PRKAB1Q9Y478 270 aa10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3DA0A087WVF3 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3IA0A087WXS9 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3EA0A087X179 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3KA0A087X1G2 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3FA6NER0 549 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 A8MXQ7 604 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3LB9A6J9 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PPP1R12AO14974 1030 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 MTSS1O43312 755 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 LATO43561 262 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBCAO75347 108 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 VPS4BO75351 444 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PIAS2O75928 621 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 AVPP01185 164 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TNNC2P02585 160 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 KRT18P05783 430 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 DLDP09622 509 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3HP0C7X1 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 VARSP26640 1264 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 CORO1AP31146 461 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PGFP49763 221 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PPP2CBP62714 309 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PPP2CAP67775 309 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 SPIDRQ14159 915 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3GQ6DHY5 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3CQ6IPX1 549 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 CRTC1Q6UUV9 634 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 TBC1D3Q8IZP1 549 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 WDR48Q8TAF3 677 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 C9orf43Q8TAL5 461 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 SAAL1Q96ER3 474 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 KLHDC7BQ96G42 594 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PLIN2Q99541 437 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 KRT82Q9NSB4 513 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 KLHL11Q9NVR0 708 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 NOL7Q9UMY1 257 aaKnown RBP10□□□□□ -0.81
SMARCAL1-213ENST00000496037 VPS4AQ9UN37 437 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
SMARCAL1-213ENST00000496037 A0A087X0B3 334 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 LY6G6EA0A0G2JKS1 128 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 K7ESM1 405 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 TACC1O75410 805 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 PRPF6O94906 941 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 LDHAP00338 332 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 KLKB1P03952 638 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 HMBSP08397 361 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 RARGP13631 454 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 GOT1P17174 413 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 HLA-FP30511 346 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 MAT2AP31153 395 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 SLC8A1P32418 973 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 PSMD8P48556 350 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ZNF131P52739 623 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ST8SIA6P61647 398 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 TNNC1P63316 161 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 EHHADHQ08426 723 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ARSHQ5FYA8 562 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ZCCHC8Q6NZY4 707 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 GUSBP11Q6P575 273 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 GPBP1Q86WP2 473 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 MMAAQ8IVH4 418 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 CPXM2Q8N436 756 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 PMM1Q92871 262 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 STRADBQ9C0K7 418 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 EPB41L5Q9HCM4 733 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ZNF71Q9NQZ8 489 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 ABCB8Q9NUT2 735 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 RASAL2Q9UJF2 1139 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 GGA2Q9UJY4 613 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 NUDT5Q9UKK9 219 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 NME7Q9Y5B8 376 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 U3KQA8 63 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 NF1P21359 2839 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
SMARCAL1-213ENST00000496037 SLC12A8A0AV02 714 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 C10orf142B7Z368 130 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 PRAMEF26H0Y7S4 382 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 J3QL48 77 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 SCAMP1O15126 338 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 SIAH2O43255 324 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 SIN3BO75182 1162 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 JMJD7P0C870 316 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 GIMD1P0DJR0 217 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 PABPC1P11940 636 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 POLR2EP19388 210 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 PTMSP20962 102 aa9.98□□□□□ -0.81
SMARCAL1-213ENST00000496037 COL8A1P27658 744 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 552.5 ms