RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 HTR3CQ8WXA8 447 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 HAPLN3Q96S86 360 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 SMOC2Q9H3U7 446 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 CCDC134Q9H6E4 229 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 LRRC4CQ9HCJ2 640 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 RAB6BQ9NRW1 208 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
CBX4-204ENST00000495122 TMLHEQ9NVH6 421 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.72■□□□□ 0.273e-12■■■■□ 26.4
CBX4-204ENST00000495122 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
CBX4-204ENST00000495122 FANCMQ8IYD8 2048 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 TMEM63AO94886 807 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 ASGR2P07307 311 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 FGFR3P22607 806 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 AMPD1P23109 780 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 PSEN1P49768 467 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 SLC5A3P53794 718 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 TPI1P60174 286 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 YWHAGP61981 247 aaKnown RBP eCLIP16.71■□□□□ 0.27
CBX4-204ENST00000495122 CREMQ03060 361 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 EIF4EBP2Q13542 120 aaPredicted RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 PPP2R5DQ14738 602 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 KCTD19Q17RG1 926 aaPredicted RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 RTP2Q5QGT7 225 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 ANKRD22Q5VYY1 191 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 BTBD8Q5XKL5 378 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 MSANTD2Q6P1R3 559 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 PRSS33Q8NF86 280 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 SPPL2BQ8TCT7 592 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 DQX1Q8TE96 717 aaKnown RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 HASPINQ8TF76 798 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 NDRG1Q92597 394 aaKnown RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 VAT1Q99536 393 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 ACSS3Q9H6R3 686 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 WDCPQ9H6R7 721 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 VPS37BQ9H9H4 285 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 SSU72Q9NP77 194 aaKnown RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 IL37Q9NZH6 218 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 PSMC3IPQ9P2W1 217 aaPredicted RBP16.71■□□□□ 0.27
CBX4-204ENST00000495122 DPP7Q9UHL4 492 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 SCML2Q9UQR0 700 aa16.71■□□□□ 0.27
CBX4-204ENST00000495122 FGF10O15520 208 aaPredicted RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 IRAK2O43187 625 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 SLC2A3P11169 496 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 GRIK1P39086 918 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 PITX1P78337 314 aaPredicted RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 COG7P83436 770 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 GUCY1A3Q02108 690 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 SLC10A2Q12908 348 aaPredicted RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 SLC39A12Q504Y0 691 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 VARS2Q5ST30 1063 aaKnown RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 IER5LQ5T953 404 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 ELMSAN1Q6PJG2 1045 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 MON1AQ86VX9 555 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 CCNJLQ8IV13 435 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 PALM2Q8IXS6 379 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 LZTR1Q8N653 840 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 BCAS4Q8TDM0 211 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 PWWP2AQ96N64 755 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 SERPINB11Q96P15 392 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 CYTH2Q99418 400 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 DNAJC17Q9NVM6 304 aaKnown RBP16.7■□□□□ 0.26
CBX4-204ENST00000495122 DONSONQ9NYP3 566 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 LIMD1Q9UGP4 676 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 GGA2Q9UJY4 613 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
CBX4-204ENST00000495122 CCDC195A0A1B0GUA6 201 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 FAM92AA1XBS5 289 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 SMIM23A6NLE4 172 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 TRDMT1O14717 391 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 TGM5O43548 720 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 MFSD11O43934 449 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 RFPL2O75678 378 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 FAM107AO95990 144 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 PDGFBP01127 241 aaPredicted RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 HOXC13P31276 330 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 STX2P32856 288 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 MAGEA3P43357 314 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 SLCO1A2P46721 670 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 GEMIN4P57678 1058 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 CTXN3Q4LDR2 81 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 UBAP2Q5T6F2 1119 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 PRSS55Q6UWB4 352 aaPredicted RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 ANKS3Q6ZW76 656 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 B4GALNT4Q76KP1 1039 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 TAC4Q86UU9 113 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 EXOC3L1Q86VI1 746 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 PYROXD2Q8N2H3 581 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms