RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 C2CD2LO14523 706 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 ATP2A2P16615 1042 aaKnown RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 MAXP61244 160 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 SLC18A2Q05940 514 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 EFEMP1Q12805 493 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 PSMD5Q16401 504 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 LRRC8BQ6P9F7 803 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 THEM5Q8N1Q8 247 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 KLHL5Q96PQ7 755 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 PHACTR1Q9C0D0 580 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 NOL6Q9H6R4 1146 aaKnown RBP10.64□□□□□ -0.71
SAMM50-206ENST00000494795 SLC40A1Q9NP59 571 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 SLC12A4Q9UP95 1085 aa10.64□□□□□ -0.71
SAMM50-206ENST00000494795 H0YHG0 523 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ARVCFO00192 962 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 OPHN1O60890 802 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 KITP10721 976 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 NMBRP28336 390 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 FAM189BP81408 668 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 GALNT2Q10471 571 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ITIH4Q14624 930 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 CTXN3Q4LDR2 81 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 NDUFAF2Q8N183 169 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 DNAAF3Q8N9W5 541 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 APOPT1Q96IL0 206 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SEPT5Q99719 369 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ZCWPW1Q9H0M4 648 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 IQANK1A0A1B0GTG1 560 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SDR42E2A6NKP2 422 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 TPP1O14773 563 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PPP1R12AO14974 1030 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 CBX6O95503 412 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 GSRP00390 522 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PRKCGP05129 697 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 TUBP50607 506 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 NCALDP61601 193 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 NIPAL4Q0D2K0 466 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 RASA2Q15283 850 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 KCTD11Q693B1 232 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.714e-24■■■■■ 43.3
SAMM50-206ENST00000494795 TTC7BQ86TV6 843 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PSTKQ8IV42 348 aaKnown RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SLC43A3Q8NBI5 491 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 C10orf82Q8WW14 230 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ZNF669Q96BR6 464 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 MANSC1Q9H8J5 431 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 FBXO6Q9NRD1 293 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 GGA2Q9UJY4 613 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 EMCNQ9ULC0 261 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ARHGAP42A6NI28 874 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 J3KR12 359 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 OAZ2O95190 189 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 FAM163BP0C2L3 166 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 DHRS4L1P0CG22 281 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 HAPLN1P10915 354 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ARRB2P32121 409 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 DUSP4Q13115 394 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 GALNTL6Q49A17 601 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 HSP90AA5PQ58FG0 334 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 FAM126BQ8IXS8 530 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PLD6Q8N2A8 252 aaKnown RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ERP27Q96DN0 273 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 DEFB118Q96PH6 123 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 NCAPGQ9BPX3 1015 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 KCNK13Q9HB14 408 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SLC2A6Q9UGQ3 507 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 ARL2BPQ9Y2Y0 163 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 MTF2Q9Y483 593 aaPredicted RBP10.63□□□□□ -0.71
SAMM50-206ENST00000494795 DNAH14Q0VDD8 3507 aa10.63□□□□□ -0.71
SAMM50-206ENST00000494795 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
SAMM50-206ENST00000494795 MYLKQ15746 1914 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 A0A0G2JND7 137 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 ZCWPW2A0A1B0GU75 182 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 FAM237BA0A1B0GVD1 139 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 CCL22O00626 93 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 COPEO14579 308 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 TRDMT1O14717 391 aaKnown RBP10.62□□□□□ -0.71
SAMM50-206ENST00000494795 CLGNO14967 610 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 MAFKO60675 156 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 DNAJC6O75061 913 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 LYPLA1O75608 230 aaPredicted RBP10.62□□□□□ -0.71
SAMM50-206ENST00000494795 SUN1O94901 812 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 SNRPAP09012 282 aaKnown RBP10.62□□□□□ -0.71
SAMM50-206ENST00000494795 TARSP26639 723 aaKnown RBP10.62□□□□□ -0.71
SAMM50-206ENST00000494795 SERPINB4P48594 390 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 IRF9Q00978 393 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 ARL13BQ3SXY8 428 aa10.62□□□□□ -0.71
SAMM50-206ENST00000494795 LACTB2Q53H82 288 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms