RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 WFIKKN2Q8TEU8 576 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 HES6Q96HZ4 224 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 FBRSL1Q9HCM7 1045 aaKnown RBP14.95□□□□□ -0.02
BRCA1-223ENST00000494123 KCND1Q9NSA2 647 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 VCANP13611 3396 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF487B1APH4 448 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 RAMP2O60895 175 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 IL4RP24394 825 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 PEX5P50542 639 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 MESP2Q0VG99 397 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 MFSD7Q6UXD7 560 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 SPOCD1Q6ZMY3 1216 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 RFX6Q8HWS3 928 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 C17orf53Q8N3J3 647 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-223ENST00000494123 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
BRCA1-223ENST00000494123 FLCNQ8NFG4 579 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 NELL2Q99435 816 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 LTB4R2Q9NPC1 389 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 NDFIP2Q9NV92 336 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF212Q9UDV6 495 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 VPS28Q9UK41 221 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 ZKSCAN5Q9Y2L8 839 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 F5P12259 2224 aa14.95□□□□□ -0.02
BRCA1-223ENST00000494123 ILVBLA1L0T0 632 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 C3orf70A6NLC5 250 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-223ENST00000494123 DDX3YO15523 660 aaKnown RBP14.94□□□□□ -0.02
BRCA1-223ENST00000494123 POLR2EP19388 210 aaKnown RBP14.94□□□□□ -0.02
BRCA1-223ENST00000494123 MZF1P28698 734 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-223ENST00000494123 SERPINB6P35237 376 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 ETFBP38117 255 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 GNG11P61952 73 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 GNA12Q03113 381 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 DMC1Q14565 340 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 GEN1Q17RS7 908 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 TFDP3Q5H9I0 405 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 PITRM1Q5JRX3 1037 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF354CQ86Y25 554 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 SLC35F6Q8N357 371 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 PCDH19Q8TAB3 1148 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 UCMAQ8WVF2 138 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 ALG3Q92685 438 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 FAF2Q96CS3 445 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 RNF157Q96PX1 679 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 COL25A1Q9BXS0 654 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-223ENST00000494123 FOXQ1Q9C009 403 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 CIPCQ9C0C6 399 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 JRKLQ9Y4A0 524 aa14.94□□□□□ -0.02
BRCA1-223ENST00000494123 TMEM221A6NGB7 291 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 SHISA7A6NL88 538 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 FAM170BA6NMN3 283 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 M0R296 226 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 DCLK1O15075 740 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 EGFP01133 1207 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 TARSP26639 723 aaKnown RBP14.93□□□□□ -0.02
BRCA1-223ENST00000494123 CDKN2BP42772 138 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 TNFRSF4P43489 277 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 NUMBP49757 651 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 COPS2P61201 443 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 LRRC32Q14392 662 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 POLD3Q15054 466 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-223ENST00000494123 EIF4HQ15056 248 aaKnown RBP14.93□□□□□ -0.02
BRCA1-223ENST00000494123 PLEKHG6Q3KR16 790 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 FUT11Q495W5 492 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 KAZNQ674X7 775 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 MBLAC2Q68D91 279 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 IL31Q6EBC2 164 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 UMODL1-AS1Q8N2C9 162 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 LZTR1Q8N653 840 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 OR52K2Q8NGK3 314 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 CCDC26Q8TAB7 109 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 LMLNQ96KR4 655 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 FEM1AQ9BSK4 669 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 SPON2Q9BUD6 331 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 MAGEH1Q9H213 219 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 ETNK2Q9NVF9 386 aa14.93□□□□□ -0.02
BRCA1-223ENST00000494123 A0A0A0MRY4 1105 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 A0A0D9SEW6 157 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PRRT4C9JH25 899 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ENC1O14682 589 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 APOL1O14791 398 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 NCAM2O15394 837 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ZFXP17010 805 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 NDST2P52849 883 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 SEC13P55735 322 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 YBEYP58557 167 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 DYNLT1P63172 113 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF211Q13398 564 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 TFDP2Q14188 446 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 LLGL1Q15334 1064 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PPP2R5EQ16537 467 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PARP15Q460N3 678 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 FBXO43Q4G163 708 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 DGKKQ5KSL6 1271 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 KIAA0907Q7Z7F0 614 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms