RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 SF3A3Q12874 501 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD46-217ENST00000493796 DLGAP5Q15398 846 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 INPP5JQ15735 1006 aaPredicted RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 PFKFB4Q16877 469 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 SMTNL2Q2TAL5 461 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 BTBD16Q32M84 506 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 MANEAQ5SRI9 462 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 TTLL5Q6EMB2 1281 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 ISM2Q6H9L7 571 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 GGT6Q6P531 493 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 LRIG3Q6UXM1 1119 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 NSMCE1Q8WV22 266 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 ATP2A3Q93084 1043 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 WACQ9BTA9 647 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 HTATIP2Q9BUP3 242 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 MLXIPQ9HAP2 919 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 DECR2Q9NUI1 292 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.18□□□□□ -1.74
CD46-217ENST00000493796 UTS2RQ9UKP6 389 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 SQORQ9Y6N5 450 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 MYOM3Q5VTT5 1437 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 FGD6Q6ZV73 1430 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 RRBP1Q9P2E9 1410 aaKnown RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 KDM5CP41229 1560 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 INO80Q9ULG1 1556 aaPredicted RBP4.18□□□□□ -1.74
CD46-217ENST00000493796 FANCAO15360 1455 aa4.18□□□□□ -1.74
CD46-217ENST00000493796 DNMT1P26358 1616 aaKnown RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 MTUS2Q5JR59 1369 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 ARAP3Q8WWN8 1544 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3DA0A087WVF3 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3IA0A087WXS9 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3EA0A087X179 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3KA0A087X1G2 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3BA6NDS4 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3FA6NER0 549 aaPredicted RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 CD8B2A6NJW9 211 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 B4DGG1 531 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3LB9A6J9 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 PROB1E7EW31 1015 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 SYT5O00445 386 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 INSIG1O15503 277 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 SKAP2O75563 359 aaPredicted RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 NDUFB8O95169 186 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 OAZ2O95190 189 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 ALDOCP09972 364 aaKnown RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3HP0C7X1 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 GALNT1Q10472 559 aaPredicted RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 FHL1Q13642 323 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 UBE4AQ14139 1066 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 ZACNQ401N2 412 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3GQ6DHY5 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3CQ6IPX1 549 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 DDIASQ8IXT1 998 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TBC1D3Q8IZP1 549 aaPredicted RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 EME1Q96AY2 570 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 SLC39A13Q96H72 371 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 CLMNQ96JQ2 1002 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 NLRP4Q96MN2 994 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 WDR83Q9BRX9 315 aaKnown RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 CRB3Q9BUF7 120 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 KATNAL1Q9BW62 490 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 FAM234AQ9H0X4 552 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 EBF3Q9H4W6 596 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 AAMDCQ9H7C9 122 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 TXNRD2Q9NNW7 524 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 SLC8A2Q9UPR5 921 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 LAMP3Q9UQV4 416 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 COPG1Q9Y678 874 aaKnown RBP4.17□□□□□ -1.74
CD46-217ENST00000493796 SCAPERQ9BY12 1400 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 DIP2CQ9Y2E4 1556 aa4.17□□□□□ -1.74
CD46-217ENST00000493796 ARHGAP5Q13017 1502 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 TMEM272A0A1B0GTI8 110 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 CCDC194A0A1B0GVG4 234 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 MBD3L5A6NJ08 208 aaPredicted RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 RHODO00212 210 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 CRYABP02511 175 aaKnown RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 ITGA2BP08514 1039 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 GYS1P13807 737 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 SERPINF1P36955 418 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 CDK7P50613 346 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 RNASELQ05823 741 aaKnown RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 PUM3Q15397 648 aaKnown RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 C6orf10Q5SRN2 563 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 ATPAF1Q5TC12 328 aaPredicted RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 ASPHD1Q5U4P2 390 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 RFX8Q6ZV50 586 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 RTL10Q7L3V2 364 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 MDGA2Q7Z553 956 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 CLEC4CQ8WTT0 213 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 HMGB4Q8WW32 186 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 SLC25A28Q96A46 364 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 RTKNQ9BST9 563 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 SORBS1Q9BX66 1292 aaKnown RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 TMEM120AQ9BXJ8 343 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 IL21RQ9HBE5 538 aa4.16□□□□□ -1.74
CD46-217ENST00000493796 LIN7CQ9NUP9 197 aaKnown RBP4.16□□□□□ -1.74
CD46-217ENST00000493796 HERC5Q9UII4 1024 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms