RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.17■□□□□ 0.18
HPS4-216ENST00000493455 DCLK1O15075 740 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 MFSD11O43934 449 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 CEP104O60308 925 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 CST8O60676 142 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 APODP05090 189 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
HPS4-216ENST00000493455 HLA-FP30511 346 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 CASQ1P31415 396 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 HCAR3P49019 387 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 MAPKAPK2P49137 400 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 SEC13P55735 322 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 MESP2Q0VG99 397 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 NCBP2-AS2Q69YL0 99 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 CXorf57Q6NSI4 855 aaKnown RBP16.17■□□□□ 0.18
HPS4-216ENST00000493455 NPNTQ6UXI9 565 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
HPS4-216ENST00000493455 RALGPS2Q86X27 583 aaPredicted RBP16.17■□□□□ 0.18
HPS4-216ENST00000493455 ETFBKMTQ8IXQ9 262 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 NPWQ8N729 165 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 PQLC3Q8N755 202 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 FIBINQ8TAL6 211 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 FAM3CQ92520 227 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 OSBPL8Q9BZF1 889 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 CIPCQ9C0C6 399 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 TRPV5Q9NQA5 729 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 VPS28Q9UK41 221 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 HEY1Q9Y5J3 304 aa16.17■□□□□ 0.18
HPS4-216ENST00000493455 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 A0A0D9SEW6 157 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 CTAGE9A4FU28 777 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 TBC1D3BA6NDS4 549 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 RAMP2O60895 175 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 KAT7O95251 611 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 ACVRL1P37023 503 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 ZXDAP98168 799 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 POLD3Q15054 466 aaPredicted RBP16.16■□□□□ 0.18
HPS4-216ENST00000493455 GEN1Q17RS7 908 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 FUT11Q495W5 492 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 SFTPA1Q8IWL2 248 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 TP53INP2Q8IXH6 220 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 APCDD1Q8J025 514 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 LRRN4Q8WUT4 740 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 FAF2Q96CS3 445 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 HERPUD2Q9BSE4 406 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 FBRSL1Q9HCM7 1045 aaKnown RBP16.16■□□□□ 0.18
HPS4-216ENST00000493455 ATP13A1Q9HD20 1204 aa16.16■□□□□ 0.18
HPS4-216ENST00000493455 KRBA1A5PL33 1030 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 WASH4PA8MWX3 477 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 RASA4BC9J798 803 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 CBX4O00257 560 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 RASA4O43374 803 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 SERPINB6P35237 376 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 COPS2P61201 443 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ETF1P62495 437 aaKnown RBP16.15■□□□□ 0.18
HPS4-216ENST00000493455 GNA12Q03113 381 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ADCY2Q08462 1091 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 TFDP2Q14188 446 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 UBXN2BQ14CS0 331 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 PPP2R5EQ16537 467 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 PITRM1Q5JRX3 1037 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 SETD3Q86TU7 594 aaPredicted RBP16.15■□□□□ 0.18
HPS4-216ENST00000493455 AHI1Q8N157 1196 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ZNF557Q8N988 423 aaPredicted RBP16.15■□□□□ 0.18
HPS4-216ENST00000493455 TERB1Q8NA31 727 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 HMCESQ96FZ2 354 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 CAPZA3Q96KX2 299 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 OSBPL9Q96SU4 736 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 FAM118BQ9BPY3 351 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 SLC2A11Q9BYW1 496 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 SLC39A8Q9C0K1 460 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 MFSD1Q9H3U5 465 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ZDHHC4Q9NPG8 344 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 WNT16Q9UBV4 365 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ZNF212Q9UDV6 495 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 TBC1D30Q9Y2I9 924 aa16.15■□□□□ 0.18
HPS4-216ENST00000493455 ILVBLA1L0T0 632 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 DCXO43602 365 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 SNAP91O60641 907 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 EGFP01133 1207 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 POLR2EP19388 210 aaKnown RBP16.14■□□□□ 0.17
HPS4-216ENST00000493455 GLDCP23378 1020 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 OXCT1P55809 520 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 GBE1Q04446 702 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
HPS4-216ENST00000493455 PLEKHG6Q3KR16 790 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 MBLAC2Q68D91 279 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 ZNF852Q6ZMS4 543 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 NYAP1Q6ZVC0 841 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 PLD5Q8N7P1 536 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 CYB5D2Q8WUJ1 264 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 SORCS1Q8WY21 1168 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 FOXQ1Q9C009 403 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 CARD9Q9H257 536 aa16.14■□□□□ 0.17
HPS4-216ENST00000493455 NOL6Q9H6R4 1146 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms