RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 KDSRQ06136 332 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 DPYSQ14117 519 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 C5orf22Q49AR2 442 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 SEL1L2Q5TEA6 688 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 C12orf40Q86WS4 652 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 PCDH19Q8TAB3 1148 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 WFDC5Q8TCV5 224 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 ZNF592Q92610 1267 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 XPO6Q96QU8 1125 aaKnown RBP17.67■□□□□ 0.42
LIME1-208ENST00000493265 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 MARK1Q9P0L2 795 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
LIME1-208ENST00000493265 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 MYOFQ9NZM1 2061 aa17.67■□□□□ 0.42
LIME1-208ENST00000493265 TRIM24O15164 1050 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 CEP104O60308 925 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 AOC1P19801 751 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 HOXC13P31276 330 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 HTR7P34969 479 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 PFKPQ01813 784 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 GAB4Q2WGN9 574 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 TFDP3Q5H9I0 405 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 FSCBQ5H9T9 825 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 MPP7Q5T2T1 576 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 C1orf228Q6PIY5 440 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 CHST9Q7L1S5 443 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 NLRP14Q86W24 1093 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 SIX5Q8N196 739 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 CCDC33Q8N5R6 958 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 RTL3Q8N8U3 475 aaKnown RBP17.66■□□□□ 0.42
LIME1-208ENST00000493265 DNASE1L2Q92874 299 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 NKD2Q969F2 451 aaPredicted RBP17.66■□□□□ 0.42
LIME1-208ENST00000493265 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
LIME1-208ENST00000493265 RNF157Q96PX1 679 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 CA14Q9ULX7 337 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 DUSP12Q9UNI6 340 aa17.66■□□□□ 0.42
LIME1-208ENST00000493265 COL4A3Q01955 1670 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 APOL1O14791 398 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 TULP3O75386 442 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 RHOCP08134 193 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 DGKGP49619 791 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 CCDC181Q5TID7 509 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 RNF219Q5W0B1 726 aaPredicted RBP17.65■□□□□ 0.42
LIME1-208ENST00000493265 ZNF354CQ86Y25 554 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 PQLC3Q8N755 202 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 HAUS1Q96CS2 278 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 CHFRQ96EP1 664 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 OSBPL8Q9BZF1 889 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 SLC2A4RGQ9NR83 387 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 ABCB8Q9NUT2 735 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 TMEM248Q9NWD8 314 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 DEC1Q9P2X7 70 aa17.65■□□□□ 0.42
LIME1-208ENST00000493265 SPECC1L-ADORA2AF8WAN1 911 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 DCLK1O15075 740 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 FANCGO15287 622 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CACNG3O60359 315 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CST8O60676 142 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 MAP3K6O95382 1288 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CD70P32970 193 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CSKP41240 450 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 COPS2P61201 443 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 ADCY2Q08462 1091 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 LMAN2Q12907 356 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 TFDP2Q14188 446 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 SLC44A4Q53GD3 710 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 C6orf118Q5T5N4 469 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 GRAMD4Q6IC98 578 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CXorf57Q6NSI4 855 aaKnown RBP17.64■□□□□ 0.41
LIME1-208ENST00000493265 ADAT2Q7Z6V5 191 aaKnown RBP17.64■□□□□ 0.41
LIME1-208ENST00000493265 CCDC105Q8IYK2 499 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 NPWQ8N729 165 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 OR52K2Q8NGK3 314 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 FIBINQ8TAL6 211 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 UBE2Q2Q8WVN8 375 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 OSBPL9Q96SU4 736 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 SPON2Q9BUD6 331 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 CARD9Q9H257 536 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 TRPV5Q9NQA5 729 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 SNX12Q9UMY4 172 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 HEY1Q9Y5J3 304 aa17.64■□□□□ 0.41
LIME1-208ENST00000493265 DFFAO00273 331 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 STK25O00506 426 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 MZF1P28698 734 aaPredicted RBP17.63■□□□□ 0.41
LIME1-208ENST00000493265 HLA-FP30511 346 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 CTHP32929 405 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 OPRD1P41143 372 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 MAPKAPK2P49137 400 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 AMPD2Q01433 879 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 MESP2Q0VG99 397 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 ANGPT1Q15389 498 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 PPP2R5EQ16537 467 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 TAZQ16635 292 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 NCBP2-AS2Q69YL0 99 aa17.63■□□□□ 0.41
LIME1-208ENST00000493265 NPNTQ6UXI9 565 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms