RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RUBCNQ92622 972 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 ALG3Q92685 438 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 AZIN2Q96A70 460 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 XPO6Q96QU8 1125 aaKnown RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 OSBPL2Q9H1P3 480 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 PCDH18Q9HCL0 1135 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 FBRSL1Q9HCM7 1045 aaKnown RBP13.83□□□□□ -0.2
MSH6-208ENST00000493177 ARHGEF4Q9NR80 690 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 OR12D3Q9UGF7 316 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 VANGL2Q9ULK5 521 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 RALGAPA1Q6GYQ0 2036 aa13.83□□□□□ -0.2
MSH6-208ENST00000493177 CEP104O60308 925 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 TSPAN3O60637 253 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 LILRB5O75023 590 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 CD48P09326 243 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 PYGMP11217 842 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 L1CAMP32004 1257 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 OPRD1P41143 372 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 SLC6A11P48066 632 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 PXNP49023 591 aaPredicted RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 TPI1P60174 286 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 AUHQ13825 339 aaKnown RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 ACBD5Q5T8D3 534 aaPredicted RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 KAZNQ674X7 775 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 RWDD4Q6NW29 188 aaKnown RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 MFSD7Q6UXD7 560 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 Q6ZNB5 142 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 TPGS1Q6ZTW0 290 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 C14orf80Q86SX3 495 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 LGI2Q8N0V4 545 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 TBC1D31Q96DN5 1066 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 HHIPQ96QV1 700 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 MAK16Q9BXY0 300 aaKnown RBP13.82□□□□□ -0.2
MSH6-208ENST00000493177 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 SPHK2Q9NRA0 654 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 STIM2Q9P246 746 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 SNX12Q9UMY4 172 aa13.82□□□□□ -0.2
MSH6-208ENST00000493177 TYW5A2RUC4 315 aaKnown RBP13.81□□□□□ -0.2
MSH6-208ENST00000493177 TBC1D3BA6NDS4 549 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 E9PAM4 449 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 NEDD8-MDP1E9PL57 170 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 K7ESF4 209 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 GREM1O60565 184 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 KAT7O95251 611 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 TDGF1P13385 188 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 GOT1P17174 413 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 SLC6A4P31645 630 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 CNR2P34972 360 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 TIE1P35590 1138 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 EIF2DP41214 584 aaKnown RBP13.81□□□□□ -0.2
MSH6-208ENST00000493177 DMWDQ09019 674 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 DPYSL3Q14195 570 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 DMC1Q14565 340 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 FAM133BQ5BKY9 247 aaKnown RBP13.81□□□□□ -0.2
MSH6-208ENST00000493177 RABGAP1LQ5R372 815 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 PAPD7Q5XG87 772 aaKnown RBP13.81□□□□□ -0.2
MSH6-208ENST00000493177 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 AADACL2Q6P093 401 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 RFWD3Q6PCD5 774 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 SPOCD1Q6ZMY3 1216 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 RFX6Q8HWS3 928 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 KIAA2013Q8IYS2 634 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 KIF18AQ8NI77 898 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.81□□□□□ -0.2
MSH6-208ENST00000493177 NELL1Q92832 810 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 PBKQ96KB5 322 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 C1orf74Q96LT6 269 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 CARD9Q9H257 536 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 C2orf42Q9NWW7 574 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 DEC1Q9P2X7 70 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 SAR1BQ9Y6B6 198 aa13.81□□□□□ -0.2
MSH6-208ENST00000493177 EML5Q05BV3 1969 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 FANCGO15287 622 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 URI1O94763 535 aaPredicted RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 LRIG2O94898 1065 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 TCP1P17987 556 aaKnown RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 EPHB2P29323 1055 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 CHKAP35790 457 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 GRIA2P42262 883 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 ARSEP51690 589 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 ZNF135P52742 658 aaPredicted RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 COPS2P61201 443 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
MSH6-208ENST00000493177 DCAF12L1Q5VU92 463 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 GRAMD4Q6IC98 578 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 RFX8Q6ZV50 586 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
MSH6-208ENST00000493177 WDR5BQ86VZ2 330 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms