RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 STOML2Q9UJZ1 356 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 ARHGAP26Q9UNA1 814 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SNX24Q9Y343 169 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 MRPS23Q9Y3D9 190 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 SH3BP1Q9Y3L3 701 aa14.47□□□□□ -0.09
PDZRN3-210ENST00000492909 KCNN4O15554 427 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 ADCY8P40145 1251 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 RPL21P46778 160 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 VPS41P49754 854 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 IRAK1P51617 712 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 HLTFQ14527 1009 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 C5orf22Q49AR2 442 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 ALFQ53S48 1182 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 RABGAP1LQ5R372 815 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 HEATR6Q6AI08 1181 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 RFWD3Q6PCD5 774 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 TMEM184AQ6ZMB5 413 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 EFHBQ8N7U6 833 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 EIF1ADQ8N9N8 165 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 GLIS1Q8NBF1 620 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 NETO2Q8NC67 525 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 TSEN2Q8NCE0 465 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 CCNYQ8ND76 341 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 LGMNQ99538 433 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 FERMT1Q9BQL6 677 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 KLC2Q9H0B6 622 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 BRD8Q9H0E9 1235 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 USP29Q9HBJ7 922 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 CFAP97Q9P2B7 532 aa14.46□□□□□ -0.09
PDZRN3-210ENST00000492909 LINC01565O15544 149 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GREM1O60565 184 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 ZNF189O75820 626 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 CNTN5O94779 1100 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 ETS1P14921 441 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GALNT2Q10471 571 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 AP1B1Q10567 949 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 CALCOCO2Q13137 446 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 PRKD1Q15139 912 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 Q6ZNB5 142 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 TFAP2DQ7Z6R9 452 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 PRUNE1Q86TP1 453 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 TP53INP2Q8IXH6 220 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 TTC16Q8NEE8 873 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 LRRN4Q8WUT4 740 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.45□□□□□ -0.13e-8■■■■□ 22.1
PDZRN3-210ENST00000492909 HDAC11Q96DB2 347 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 RTP4Q96DX8 246 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 SNF8Q96H20 258 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 CELF6Q96J87 481 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 RETREG1Q9H6L5 497 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 NDFIP2Q9NV92 336 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 NFU1Q9UMS0 254 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 ZNF510Q9Y2H8 683 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GOLGA6CA6NDK9 693 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 LEFTY2O00292 366 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 SHOX2O60902 331 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GLP2RO95838 553 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 ZSCAN5DPP0CG00 497 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GOLGA6DP0CG33 693 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 CEBPBP17676 345 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GARSP41250 739 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 PPIDQ08752 370 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 RARS2Q5T160 578 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 HTR3DQ70Z44 454 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 UMODL1-AS1Q8N2C9 162 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 MREGQ8N565 214 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 MAFAQ8NHW3 353 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 HTR3CQ8WXA8 447 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 ING5Q8WYH8 240 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 MYEOVQ96EZ4 313 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 SMG9Q9H0W8 520 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GOLGA6AQ9NYA3 693 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 GRHL1Q9NZI5 618 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 WHRNQ9P202 907 aa14.45□□□□□ -0.1
PDZRN3-210ENST00000492909 NUP210Q8TEM1 1887 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 NYNRINQ9P2P1 1898 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 XIRP2A4UGR9 3374 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 DFFAO00273 331 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 SCAMP3O14828 347 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 STK10O94804 968 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 ITIH2P19823 946 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 IVDP26440 423 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 MAPKAPK2P49137 400 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 NDST2P52849 883 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 GPS1Q13098 491 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 SKIV2LQ15477 1246 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 P3H1Q32P28 736 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 TTC39BQ5VTQ0 682 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 AFMIDQ63HM1 303 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 EP400NLQ6ZTU2 488 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 CIR1Q86X95 450 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 ARHGAP12Q8IWW6 846 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 CFAP52Q8N1V2 620 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 BBOF1Q8ND07 529 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 SH3RF2Q8TEC5 729 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 LRRC45Q96CN5 670 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 PRICKLE1Q96MT3 831 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 FAM129AQ9BZQ8 928 aa14.44□□□□□ -0.1
PDZRN3-210ENST00000492909 TDP1Q9NUW8 608 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms