RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CCDC173Q0VFZ6 552 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 BNIP3Q12983 259 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 STILQ15468 1287 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 CBWD6Q4V339 395 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 HS1BP3Q53T59 392 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
SND1-215ENST00000492772 CBWD3Q5JTY5 395 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 CBWD5Q5RIA9 395 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 TBC1D3GQ6DHY5 549 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 TBC1D3CQ6IPX1 549 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 DSG4Q86SJ6 1040 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 SPATS2Q86XZ4 545 aaKnown RBP11.38□□□□□ -0.59
SND1-215ENST00000492772 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 TBC1D3Q8IZP1 549 aaPredicted RBP11.38□□□□□ -0.59
SND1-215ENST00000492772 STK40Q8N2I9 435 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 UBR7Q8N806 425 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 SLC35F5Q8WV83 523 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 FAM131CQ96AQ9 280 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 LGMNQ99538 433 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
SND1-215ENST00000492772 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 ATMQ13315 3056 aa11.38□□□□□ -0.59
SND1-215ENST00000492772 M0QYV0 167 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 SART1O43290 800 aaKnown RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 PLRG1O43660 514 aaKnown RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 APOEP02649 317 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 DRD3P35462 400 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 TMPRSS3P57727 454 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 SULT2A1Q06520 285 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 SETMARQ53H47 684 aaPredicted RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 FSCBQ5H9T9 825 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 BROXQ5VW32 411 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 PMF1Q6P1K2 205 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 MMS22LQ6ZRQ5 1243 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 TRIM69Q86WT6 500 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 ZNF248Q8NDW4 579 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 DQX1Q8TE96 717 aaKnown RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 PTPRN2Q92932 1015 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 MYEOVQ96EZ4 313 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 HSFY1Q96LI6 401 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 ZNF578Q96N58 590 aaPredicted RBP11.37□□□□□ -0.59
SND1-215ENST00000492772 TRIM62Q9BVG3 475 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 TJP2Q9UDY2 1190 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 SLCO3A1Q9UIG8 710 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 MGAQ8IWI9 3026 aa11.37□□□□□ -0.59
SND1-215ENST00000492772 FAM237AA0A1B0GTK4 181 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 J3QKU1 62 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 PIK3R2O00459 728 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 SIGLEC6O43699 453 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 SDC3O75056 442 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 GABBR2O75899 941 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 MOCS2O96007 188 aaPredicted RBP11.36□□□□□ -0.59
SND1-215ENST00000492772 MT-CO3P00414 261 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 DAB2P98082 770 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 RHDQ02161 417 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 STAT4Q14765 748 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
SND1-215ENST00000492772 TTC39BQ5VTQ0 682 aaPredicted RBP11.36□□□□□ -0.59
SND1-215ENST00000492772 FAM46CQ5VWP2 391 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 TMEM270Q6UE05 265 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 KDM7AQ6ZMT4 941 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 LGI2Q8N0V4 545 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 LSMEM2Q8N112 164 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 CFAP52Q8N1V2 620 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 CLEC4CQ8WTT0 213 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 OR8D1Q8WZ84 308 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 TFAP2BQ92481 460 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 WBP1Q96G27 269 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 SLC39A13Q96H72 371 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 RPL10LQ96L21 214 aaKnown RBP11.36□□□□□ -0.59
SND1-215ENST00000492772 SPATA32Q96LK8 384 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 TSG101Q99816 390 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 ARHGAP20Q9P2F6 1191 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
SND1-215ENST00000492772 MAST4O15021 2626 aa11.36□□□□□ -0.59
SND1-215ENST00000492772 C1QTNF3-AMACRE9PGA6 284 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 F5H5T6 163 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 PRAMEF26H0Y7S4 382 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 ALOX15BO15296 676 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
SND1-215ENST00000492772 RTN2O75298 545 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 TACR2P21452 398 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 MAT2AP31153 395 aaKnown RBP11.35□□□□□ -0.59
SND1-215ENST00000492772 STK19P49842 368 aaPredicted RBP11.35□□□□□ -0.59
SND1-215ENST00000492772 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
SND1-215ENST00000492772 NDUFA8P51970 172 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 OXCT1P55809 520 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 NUCB2P80303 420 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 KCNH2Q12809 1159 aa11.35□□□□□ -0.59
SND1-215ENST00000492772 CNGA2Q16280 664 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms