RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PGBD4Q96DM1 585 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 CNDP1Q96KN2 507 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 KLHL32Q96NJ5 620 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 NXF1Q9UBU9 619 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 ZNHIT2Q9UHR6 403 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 GOLGA8QA0A0J9YX86 632 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 E2F8A0AVK6 867 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 GOLGA8OA6NCC3 632 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 GOLGA8NF8WBI6 632 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 BCAS2O75934 225 aaPredicted RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 ZNF26P17031 533 aaPredicted RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 EPHA3P29320 983 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 TYK2P29597 1187 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 TCF7P36402 384 aaPredicted RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 CRADDP78560 199 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 GRM1Q13255 1194 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 PDK2Q15119 407 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 SLC9A4Q6AI14 798 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 PATL1Q86TB9 770 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 RP9Q8TA86 221 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 AGR3Q8TD06 166 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 RXFP2Q8WXD0 754 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 RCN3Q96D15 328 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 XYLT2Q9H1B5 865 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 PCDH18Q9HCL0 1135 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 JPH1Q9HDC5 661 aaPredicted RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 EPS15L1Q9UBC2 864 aa19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 PAIP2BQ9ULR5 123 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-206ENST00000490969 BOLA2-SMG1P6H3BVE0 249 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 XPO1O14980 1071 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 GCATO75600 419 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 RNASEH2AO75792 299 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 H6PDO95479 791 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 ME2P23368 584 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 TFAMQ00059 246 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 STILQ15468 1287 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 NRF1Q16656 503 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 C1QTNF12Q5T7M4 302 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 NAPRTQ6XQN6 538 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 EEPD1Q7L9B9 569 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 CDKL3Q8IVW4 592 aaPredicted RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 TNS4Q8IZW8 715 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 PGAM4Q8N0Y7 254 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 EME1Q96AY2 570 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 SLC10A4Q96EP9 437 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 SQORQ9Y6N5 450 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 DGKIO75912 1065 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 PDGFRAP16234 1089 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 PTPN1P18031 435 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 ENTPD1P49961 510 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 ACTR2P61160 394 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 TXNL4AP83876 142 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 MGAT5BQ3V5L5 792 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 TDRD5Q8NAT2 981 aaKnown RBP19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 SLC4A5Q9BY07 1137 aa19.76■□□□□ 0.75
SNAPC3-206ENST00000490969 MCM3APO60318 1980 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 C7orf72A4D263 438 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 C2CD4BA6NLJ0 364 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 ENO3P13929 434 aaPredicted RBP19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 ARL2P36404 184 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 DPP6P42658 865 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 SMAD1Q15797 465 aaKnown RBP19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 CCDC153Q494R4 210 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 TCHPQ9BT92 498 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 NUF2Q9BZD4 464 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 OSBPL6Q9BZF3 934 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 WDR55Q9H6Y2 383 aaPredicted RBP19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 ARHGEF37A1IGU5 675 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 MICAL2O94851 1124 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 SCYL2Q6P3W7 929 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 ABHD15Q6UXT9 468 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 GRIN3AQ8TCU5 1115 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 WDR41Q9HAD4 459 aa19.75■□□□□ 0.75
SNAPC3-206ENST00000490969 STX16-NPEPL1H3BU86 382 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 NEMP1O14524 444 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 PDAP1Q13442 181 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 SEMA5AQ13591 1074 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 ZNF597Q96LX8 424 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 CAAP1Q9H8G2 361 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 MTMR10Q9NXD2 777 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 TMEM114B3SHH9 223 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 H3BNH8 94 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 M0QYV0 167 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 ACOT8O14734 319 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 AMHP03971 560 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 NELFEP18615 380 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 CDH8P55286 799 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 NUP107P57740 925 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 NAB1Q13506 487 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 C16orf72Q14CZ0 275 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 CMC1Q7Z7K0 106 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 CARM1Q86X55 608 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 RANBP9Q96S59 729 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 ACO2Q99798 780 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 TMEM134Q9H6X4 195 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 MYRFQ9Y2G1 1151 aa19.74■□□□□ 0.75
SNAPC3-206ENST00000490969 H0YJX3 145 aa19.73■□□□□ 0.75
SNAPC3-206ENST00000490969 PIK3R2O00459 728 aa19.73■□□□□ 0.75
SNAPC3-206ENST00000490969 MAFGO15525 162 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms