RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SHC3Q92529 594 aa20.34■□□□□ 0.85
SREBF1-216ENST00000490796 CPXM1Q96SM3 734 aa20.34■□□□□ 0.85
SREBF1-216ENST00000490796 AASDHPPTQ9NRN7 309 aa20.34■□□□□ 0.85
SREBF1-216ENST00000490796 SERGEFQ9UGK8 458 aa20.34■□□□□ 0.85
SREBF1-216ENST00000490796 PCDHGC3Q9UN70 934 aa20.34■□□□□ 0.85
SREBF1-216ENST00000490796 ITIH6Q6UXX5 1313 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 ASPMQ8IZT6 3477 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 A0A1W2PPC4 97 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 IGHV4-34P06331 123 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 GOT1P17174 413 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 PON1P27169 355 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 NUMBP49757 651 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 STK19P49842 368 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-216ENST00000490796 APBA1Q02410 837 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 ELAVL3Q14576 367 aaKnown RBP20.33■□□□□ 0.85
SREBF1-216ENST00000490796 ACCSLQ4AC99 568 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 DSG4Q86SJ6 1040 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 SLCO6A1Q86UG4 719 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 C1orf131Q8NDD1 294 aaKnown RBP20.33■□□□□ 0.85
SREBF1-216ENST00000490796 OR14C36Q8NHC7 312 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 SLC2A13Q96QE2 648 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 ADAMTS1Q9UHI8 967 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 SLC25A13Q9UJS0 675 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 DNAJC12Q9UKB3 198 aa20.33■□□□□ 0.85
SREBF1-216ENST00000490796 PKD1L2Q7Z442 2459 aa20.33■□□□□ 0.84
SREBF1-216ENST00000490796 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-216ENST00000490796 H0Y8X5 98 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 CTSKP43235 329 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 BPIFB4P59827 614 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 ZNF177Q13360 481 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-216ENST00000490796 CCDC157Q569K6 752 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 SLC45A4Q5BKX6 768 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 SMYD5Q6GMV2 418 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 DBX2Q6ZNG2 339 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 FAM183BPQ6ZVS7 135 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 WDTC1Q8N5D0 677 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 PTPRN2Q92932 1015 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 SLC6A18Q96N87 628 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 FAM129BQ96TA1 746 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 TPX2Q9ULW0 747 aaKnown RBP20.32■□□□□ 0.84
SREBF1-216ENST00000490796 ANKRD11Q6UB99 2663 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-216ENST00000490796 ZFHX4Q86UP3 3567 aa20.32■□□□□ 0.84
SREBF1-216ENST00000490796 ZFYVE26Q68DK2 2539 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3DA0A087WVF3 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3IA0A087WXS9 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3EA0A087X179 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3KA0A087X1G2 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3FA6NER0 549 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3LB9A6J9 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 PES1O00541 588 aaKnown RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 VILLO15195 856 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 ATXN1LP0C7T5 689 aaKnown RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3HP0C7X1 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 PRKCSHP14314 528 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 ZNF18P17022 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 MZF1P28698 734 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 CCR5P51681 352 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 IL9RQ01113 521 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 SCAPQ12770 1279 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 AUHQ13825 339 aaKnown RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 MAN2A1Q16706 1144 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 FAM46CQ5VWP2 391 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3GQ6DHY5 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3CQ6IPX1 549 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 FBXL22Q6P050 247 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 CCNI2Q6ZMN8 369 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 TBC1D3Q8IZP1 549 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 OR8D1Q8WZ84 308 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 SPAG5Q96R06 1193 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 PRMT1Q99873 361 aaKnown RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 RALYQ9UKM9 306 aaKnown RBP20.31■□□□□ 0.84
SREBF1-216ENST00000490796 VANGL2Q9ULK5 521 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 BTBD3Q9Y2F9 522 aa20.31■□□□□ 0.84
SREBF1-216ENST00000490796 GOLGA4Q13439 2230 aaKnown RBP20.3■□□□□ 0.84
SREBF1-216ENST00000490796 M0QYT0 321 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 TNFSF14O43557 240 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 PCDHGA12O60330 932 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 DAB1O75553 588 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 CD38P28907 300 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 NOS2P35228 1153 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 PLK1P53350 603 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 SLC6A3Q01959 620 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 EIF4EBP2Q13542 120 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-216ENST00000490796 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-216ENST00000490796 AADATQ8N5Z0 425 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 BAHD1Q8TBE0 780 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-216ENST00000490796 SERAC1Q96JX3 654 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 SIK2Q9H0K1 926 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 CCDC86Q9H6F5 360 aaKnown RBP20.3■□□□□ 0.84
SREBF1-216ENST00000490796 RRN3Q9NYV6 651 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 FTSJ1Q9UET6 329 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 VPS28Q9UK41 221 aa20.3■□□□□ 0.84
SREBF1-216ENST00000490796 FOXN3O00409 490 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-216ENST00000490796 CLDN11O75508 207 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ERBB2P04626 1255 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ADPRHP54922 357 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 RNASE9P60153 205 aaKnown RBP20.29■□□□□ 0.84
SREBF1-216ENST00000490796 CENPCQ03188 943 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 RAPGEF1Q13905 1077 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms