RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 QTRT2Q9H974 415 aaKnown RBP13.09□□□□□ -0.31
SHOX2-205ENST00000490689 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 PPARGP37231 505 aaPredicted RBP13.08□□□□□ -0.32
SHOX2-205ENST00000490689 CCNG1P51959 295 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 THOP1P52888 689 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 CAPSQ13938 189 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 PLCL1Q15111 1095 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 RBBP7Q16576 425 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 TMEM63BQ5T3F8 832 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 NAPEPLDQ6IQ20 393 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF280CQ8ND82 737 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 MOCOSQ96EN8 888 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 CEP19Q96LK0 163 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 CCDC28BQ9BUN5 200 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 PCDHAC1Q9H158 963 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 A0A087WZ62 844 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 DAB1O75553 588 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 METTL18O95568 372 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 ASLP04424 464 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
SHOX2-205ENST00000490689 XIAPP98170 497 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 NFYCQ13952 458 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 LY6KQ17RY6 165 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SLC39A4Q6P5W5 647 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
SHOX2-205ENST00000490689 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
SHOX2-205ENST00000490689 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 CKMT2P17540 419 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 ATP6V1B2P21281 511 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SERPINB1P30740 379 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 HSD17B4P51659 736 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SLC5A3P53794 718 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 TWF2Q6IBS0 349 aaKnown RBP13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SLC41A1Q8IVJ1 513 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SCN4BQ8IWT1 228 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 DHRSXQ8N5I4 330 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 LRTOMTQ8WZ04 291 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 RNF145Q96MT1 663 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SPATA13Q96N96 652 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
SHOX2-205ENST00000490689 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 CHRNGP07510 517 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 FGFR1P11362 822 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ITGAXP20702 1163 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 KCNK10P57789 538 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 CTBP1Q13363 440 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 NR1D2Q14995 579 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ARL13AQ5H913 290 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 STK32CQ86UX6 486 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 PLD3Q8IV08 490 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TTC39CQ8N584 583 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ATPAF2Q8N5M1 289 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ARL10Q8N8L6 244 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 RP9Q8TA86 221 aaKnown RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 DLG3Q92796 817 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 GLMNQ92990 594 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 BTBD9Q96Q07 612 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 OR52B2Q96RD2 323 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 KCNU1A8MYU2 1149 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SLCO1B7G3V0H7 640 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TK2O00142 265 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 FOXD2O60548 495 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SLC7A2P52569 658 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 DMPKQ09013 629 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 LAMC2Q13753 1193 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ZNF470Q6ECI4 717 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 AMIGO3Q86WK7 504 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 DEFB106AQ8N104 65 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 APPL2Q8NEU8 664 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ADCY4Q8NFM4 1077 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 ITFG2Q969R8 447 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 COQ10BQ9H8M1 238 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 DSEQ9UL01 958 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 MYO1GB0I1T2 1018 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SUPT3HB4E1H0 165 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 H0Y626 953 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TRIM16O95361 564 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 PGK2P07205 417 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 SLC6A3Q01959 620 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TSTA3Q13630 321 aaPredicted RBP13.07□□□□□ -0.32
SHOX2-205ENST00000490689 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
SHOX2-205ENST00000490689 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms