RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CDK5RAP1Q96SZ6 601 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 EDEM2Q9BV94 578 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 ZCCHC2Q9C0B9 1178 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 CIPCQ9C0C6 399 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 OLA1Q9NTK5 396 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 ABCB8Q9NUT2 735 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 STOML2Q9UJZ1 356 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 PCDHGC4Q9Y5F7 938 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 SNX10Q9Y5X0 201 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 SLCO1B1Q9Y6L6 691 aa7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 ASCC3Q8N3C0 2202 aaKnown RBP7.6□□□□□ -1.19
PRPF4B-208ENST00000490653 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 FGFR1OPO95684 399 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 MOCS2O96007 188 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 ERBB2P04626 1255 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 CYBBP04839 570 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 TFE3P19532 575 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 KLK7P49862 253 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 RPL6Q02878 288 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 RING1Q06587 406 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 ZNF33AQ06730 810 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 LMAN2Q12907 356 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 EIF4EBP2Q13542 120 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 STILQ15468 1287 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 EXOC3L4Q17RC7 722 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 PREPLQ4J6C6 727 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 VWA3BQ502W6 1294 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 C2CD6Q53TS8 623 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 DCAF6Q58WW2 860 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 TRIM61Q5EBN2 209 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 MBLAC2Q68D91 279 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 IL31Q6EBC2 164 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 CHSY3Q70JA7 882 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 TRMT11Q7Z4G4 463 aaKnown RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 C14orf80Q86SX3 495 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 SLC47A2Q86VL8 602 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 TMPRSS6Q8IU80 811 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 DEFB106AQ8N104 65 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 MLKLQ8NB16 471 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 SHC3Q92529 594 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 FAM149B1Q96BN6 582 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 MYO19Q96H55 970 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 PRICKLE1Q96MT3 831 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 PSMG3-AS1Q96PY0 264 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 CPXM1Q96SM3 734 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 ITM2CQ9NQX7 267 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 WSB2Q9NYS7 404 aaPredicted RBP7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 PILRBQ9UKJ0 227 aa7.59□□□□□ -1.19
PRPF4B-208ENST00000490653 PLXND1Q9Y4D7 1925 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SYNJ2BP-COX16A0A087WUM0 186 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 FBXO21O94952 628 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TRUB2O95900 331 aaKnown RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 IGLV3-25P01717 112 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 EPHX1P07099 455 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PABPC1P11940 636 aaKnown RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 ACADSBP45954 432 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 MAPK8P45983 427 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 IRAK1P51617 712 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM193AP78312 1265 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PDCLQ13371 301 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 DRAP1Q14919 205 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 MAN2A1Q16706 1144 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TPD52L1Q16890 204 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PTPN20Q4JDL3 420 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 MS4A13Q5J8X5 152 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SH3PXD2AQ5TCZ1 1133 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 LYSMD4Q5XG99 296 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 RAP1GAP2Q684P5 730 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 OR6B2Q6IFH4 312 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM183BPQ6ZVS7 135 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 ANKS1BQ7Z6G8 1248 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PHLDB2Q86SQ0 1253 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM124AQ86V42 546 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 CIR1Q86X95 450 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SYT12Q8IV01 421 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 APCDD1Q8J025 514 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 LGI2Q8N0V4 545 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 CARNMT1Q8N4J0 409 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 C1orf131Q8NDD1 294 aaKnown RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 OR52K2Q8NGK3 314 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 STK32AQ8WU08 396 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TOE1Q96GM8 510 aaKnown RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF419Q96HQ0 510 aaPredicted RBP7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SPACA7Q96KW9 195 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 MRGPRX3Q96LB0 322 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 HSPA12BQ96MM6 686 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TUBGCP2Q9BSJ2 902 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 GPR174Q9BXC1 333 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC2A11Q9BYW1 496 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 NUP62CLQ9H1M0 184 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 VPS16Q9H269 839 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TMEM245Q9H330 911 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 NDST4Q9H3R1 872 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 THAP9Q9H5L6 903 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PRDM16Q9HAZ2 1276 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PRSS16Q9NQE7 514 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 ANLNQ9NQW6 1124 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms