RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CTAGE6Q86UF2 777 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
SNX12-205ENST00000490561 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CDKL3Q8IVW4 592 aaPredicted RBP13.59□□□□□ -0.23
SNX12-205ENST00000490561 ADHFE1Q8IWW8 467 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CTAGE4Q8IX94 777 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CARNMT1Q8N4J0 409 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 FIBINQ8TAL6 211 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 ACTL9Q8TC94 416 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CSGALNACT1Q8TDX6 532 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 DNASE1L2Q92874 299 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 MYEOVQ96EZ4 313 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 HERPUD2Q9BSE4 406 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 PLA2G2FQ9BZM2 168 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 LRRC19Q9H756 370 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 BRD9Q9H8M2 597 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 DTLQ9NZJ0 730 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 KIAA1522Q9P206 1035 aaPredicted RBP13.59□□□□□ -0.23
SNX12-205ENST00000490561 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
SNX12-205ENST00000490561 CXorf51AA0A1B0GTR3 108 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 CFAP69A5D8W1 941 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 LOC730098B7Z3J9 87 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 MTSS1O43312 755 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 CACNG3O60359 315 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 EIF2DP41214 584 aaKnown RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 IRAK1P51617 712 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 TUBB4BP68371 445 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 PFKPQ01813 784 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 GNA12Q03113 381 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 GBE1Q04446 702 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 GALNT2Q10471 571 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 GRM2Q14416 872 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 POLD3Q15054 466 aaPredicted RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 SIX1Q15475 284 aaPredicted RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 TIGD7Q6NT04 549 aaPredicted RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 ATPAF2Q8N5M1 289 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 SPATA4Q8NEY3 305 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 GRK7Q8WTQ7 553 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 FATE1Q969F0 183 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 NKD2Q969F2 451 aaPredicted RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 ASIC4Q96FT7 647 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 OLFM3Q96PB7 478 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 KLC2Q9H0B6 622 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 EBF3Q9H4W6 596 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 KCNK12Q9HB15 430 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 HPS4Q9NQG7 708 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
SNX12-205ENST00000490561 DRG1Q9Y295 367 aaKnown RBP13.58□□□□□ -0.24
SNX12-205ENST00000490561 TCRBV7S2A1N4TA0A589 114 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 ZSCAN5CA6NGD5 496 aaPredicted RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 RASA4BC9J798 803 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 H7C0C1 242 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 DFFAO00273 331 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 PDE2AO00408 941 aaPredicted RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 RASA4O43374 803 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 LIASO43766 372 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 IL9P15248 144 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 ARSAP15289 507 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 PECAM1P16284 738 aaPredicted RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 ATP5OP48047 213 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 GEMIN4P57678 1058 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 BYSLQ13895 437 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 E2F5Q15329 346 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 SLC45A4Q5BKX6 768 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 CXorf57Q6NSI4 855 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 NPNTQ6UXI9 565 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 ARHGAP12Q8IWW6 846 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 SUGP1Q8IWZ8 645 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 NPWQ8N729 165 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX12-205ENST00000490561 PRELID2Q8N945 189 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 SLC35B2Q8TB61 432 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 NSMCE1Q8WV22 266 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 TFB1MQ8WVM0 346 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 MAGOHBQ96A72 148 aaKnown RBP13.57□□□□□ -0.24
SNX12-205ENST00000490561 HDAC11Q96DB2 347 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 TSGA13Q96PP4 275 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 QKIQ96PU8 341 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX12-205ENST00000490561 AP1M1Q9BXS5 423 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 SLC39A8Q9C0K1 460 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 MUC3BQ9H195 1237 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 SMARCAL1Q9NZC9 954 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 LIMD1Q9UGP4 676 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 HPCAL4Q9UM19 191 aa13.57□□□□□ -0.24
SNX12-205ENST00000490561 BCLAF3A2AJT9 711 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 ARNTLO00327 626 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 STK10O94804 968 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms