RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 NPHP1O15259 732 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 FGBP02675 491 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 CYP21A2P08686 494 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 CYP4B1P13584 511 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 PKMP14618 531 aaKnown RBP5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 HOXD9P28356 352 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 CHRNA5P30532 468 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 SLC12A1Q13621 1099 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 RAPGEF1Q13905 1077 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 ANKRD1Q15327 319 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZNF484Q5JVG2 852 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 MDGA2Q7Z553 956 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 HDHD5Q9BXW7 423 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 RMI1Q9H9A7 625 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 LUZP4Q9P127 313 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 FBXO4Q9UKT5 387 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 RCE1Q9Y256 329 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 BTBD3Q9Y2F9 522 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 PKP3Q9Y446 797 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 CXorf65A6NEN9 183 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 STX16-NPEPL1H3BU86 382 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 STX16O14662 325 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 ANP32CO43423 234 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 TLR2O60603 784 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 RPS6KA3P51812 740 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 PGM5Q15124 567 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 RABEP1Q15276 862 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 DLGAP5Q15398 846 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 ETFDHQ16134 617 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 PAPD7Q5XG87 772 aaKnown RBP5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 SLC30A9Q6PML9 568 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 DEF8Q6ZN54 512 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 B4GALNT4Q76KP1 1039 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 MRPL10Q7Z7H8 261 aaKnown RBP5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 LINS1Q8NG48 757 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 VOPP1Q96AW1 172 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 TXNRD2Q9NNW7 524 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 DTX4Q9Y2E6 619 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 GPR52Q9Y2T5 361 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZMYM2Q9UBW7 1377 aa5.37□□□□□ -1.55
HMGB1P38-201ENST00000490557 TMEM247A6NEH6 219 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 NPIPB13A6NJU9 1138 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 SAC3D1A6NKF1 404 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 NPIPB5A8MRT5 1133 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 NPIPB4C9JG80 1138 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 HLA-DQA2P01906 255 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ACP5P13686 325 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 CPA1P15085 419 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZNF81P51508 661 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 CYP2J2P51589 502 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 SSBP2P81877 361 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 PMPCAQ10713 525 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 THOC5Q13769 683 aaKnown RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 KLF9Q13886 244 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ALG10Q5BKT4 473 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ALG10BQ5I7T1 473 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 IGFN1Q86VF2 1251 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 DDIASQ8IXT1 998 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 C16orf52Q8NHV5 167 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 PPM1EQ8WY54 764 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 IP6K1Q92551 441 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 CENPIQ92674 756 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZNF419Q96HQ0 510 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 CLMNQ96JQ2 1002 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 PPP1R10Q96QC0 940 aaKnown RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 PIMREGQ9BSJ6 248 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 TRMOQ9BU70 441 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ARHGAP39Q9C0H5 1083 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ACAD9Q9H845 621 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 RASSF1Q9NS23 344 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 THAP1Q9NVV9 213 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZNF70Q9UC06 446 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 KLQ9UEF7 1012 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 AGO2Q9UKV8 859 aaKnown RBP5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 LAMP3Q9UQV4 416 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 DNAJC16Q9Y2G8 782 aa5.36□□□□□ -1.55
HMGB1P38-201ENST00000490557 KIR2DS5A0A0G2JLQ3 304 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 TCRBV7S3A2A0A539 114 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 KCNJ18B7U540 433 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 KIR2DS3K7RE56 304 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 EIF3FO00303 357 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZC3H11AO75152 810 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 CSF1P09603 554 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 LYL1P12980 280 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 MAPK9P45984 424 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 GAD2Q05329 585 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 EFR3AQ14156 821 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 MIDNQ504T8 468 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 KIAA1755Q5JYT7 1200 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 TTC39AQ5SRH9 613 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 MTFR2Q6P444 385 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 GALNT7Q86SF2 657 aa5.35□□□□□ -1.55
HMGB1P38-201ENST00000490557 CCDC25Q86WR0 208 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms