RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 STK19P49842 368 aaPredicted RBP18.35■□□□□ 0.53
YIPF3-208ENST00000490447 OXCT1P55809 520 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 PDCLQ13371 301 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 MORC3Q14149 939 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 ELAVL3Q14576 367 aaKnown RBP18.35■□□□□ 0.53
YIPF3-208ENST00000490447 TMEM110Q86TL2 294 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 STK40Q8N2I9 435 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 RAXQ9Y2V3 346 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 ATRXP46100 2492 aa18.35■□□□□ 0.53
YIPF3-208ENST00000490447 SYNJ2BP-COX16A0A087WUM0 186 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3DA0A087WVF3 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3IA0A087WXS9 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3EA0A087X179 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3KA0A087X1G2 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 A0A1B0GVM2 712 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3FA6NER0 549 aaPredicted RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TCAF2A6NFQ2 919 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3LB9A6J9 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 YKT6O15498 198 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3HP0C7X1 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 BMP6P22004 513 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 MZF1P28698 734 aaPredicted RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CCR1P32246 355 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 USP8P40818 1118 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 ARRB1P49407 418 aaPredicted RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 NUMBP49757 651 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CCR5P51681 352 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 ADPRHP54922 357 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CDK17Q00537 523 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 SMAD1Q15797 465 aaKnown RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 COL28A1Q2UY09 1125 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3GQ6DHY5 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3CQ6IPX1 549 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 DHRS13Q6UX07 377 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 DSG4Q86SJ6 1040 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 GATAD2AQ86YP4 633 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CREBRFQ8IUR6 639 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 TBC1D3Q8IZP1 549 aaPredicted RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CCAR2Q8N163 923 aaKnown RBP18.34■□□□□ 0.53
YIPF3-208ENST00000490447 AADATQ8N5Z0 425 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 PTPRN2Q92932 1015 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 SERAC1Q96JX3 654 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 PPP1R9BQ96SB3 815 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 FAM129BQ96TA1 746 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 DKK4Q9UBT3 224 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 CYTH4Q9UIA0 394 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 SLC25A13Q9UJS0 675 aa18.34■□□□□ 0.53
YIPF3-208ENST00000490447 FAM149AA5PLN7 773 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 IGLV3-25P01717 112 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 PRAMEF14Q5SWL7 426 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 CIR1Q86X95 450 aaPredicted RBP18.33■□□□□ 0.53
YIPF3-208ENST00000490447 MARCH9Q86YJ5 346 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 HNRNPLLQ8WVV9 542 aaKnown RBP18.33■□□□□ 0.53
YIPF3-208ENST00000490447 RPRD1AQ96P16 312 aaPredicted RBP18.33■□□□□ 0.53
YIPF3-208ENST00000490447 NOX5Q96PH1 765 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 EBF2Q9HAK2 575 aa18.33■□□□□ 0.53
YIPF3-208ENST00000490447 LOC400499M0QZD8 3231 aa18.33■□□□□ 0.52
YIPF3-208ENST00000490447 TRABD2BA6NFA1 517 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 ENC1O14682 589 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 LDOC1O95751 146 aaPredicted RBP18.32■□□□□ 0.52
YIPF3-208ENST00000490447 WNT1P04628 370 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 GLI1P08151 1106 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 HNF1BP35680 557 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 PITX1P78337 314 aaPredicted RBP18.32■□□□□ 0.52
YIPF3-208ENST00000490447 CYP4F3Q08477 520 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 MTA1Q13330 715 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 KCNJ12Q14500 433 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 ARHGAP44Q17R89 818 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 ACCSLQ4AC99 568 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 EFHC1Q5JVL4 640 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 FAM46CQ5VWP2 391 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.32■□□□□ 0.52
YIPF3-208ENST00000490447 OXR1Q8N573 874 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 PDCD7Q8N8D1 485 aaKnown RBP18.32■□□□□ 0.52
YIPF3-208ENST00000490447 OR8D1Q8WZ84 308 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 TMEM131Q92545 1883 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 CNDP2Q96KP4 475 aaKnown RBP18.32■□□□□ 0.52
YIPF3-208ENST00000490447 ACP6Q9NPH0 428 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 PLXNB3Q9ULL4 1909 aa18.32■□□□□ 0.52
YIPF3-208ENST00000490447 HSF2BPO75031 334 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 ACAP1Q15027 740 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 TAF5Q15542 800 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 NAPEPLDQ6IQ20 393 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 TRIM65Q6PJ69 517 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PRPF39Q86UA1 669 aaKnown RBP18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 TMPRSS12Q86WS5 348 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 DEFB106AQ8N104 65 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PRMT1Q99873 361 aaKnown RBP18.31■□□□□ 0.52
YIPF3-208ENST00000490447 CRACR2AQ9BSW2 395 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 KDM4CQ9H3R0 1056 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 ASNSD1Q9NWL6 643 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 APEX2Q9UBZ4 518 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PCDHGA1Q9Y5H4 931 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 PTPRBP23467 1997 aa18.31■□□□□ 0.52
YIPF3-208ENST00000490447 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms