RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DTX4Q9Y2E6 619 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 CRYL1Q9Y2S2 319 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 GDAQ9Y2T3 454 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 A0A1B0GVC2 190 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 C2CD4BA6NLJ0 364 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 KCNJ18B7U540 433 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 EYA2O00167 538 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 PEX12O00623 359 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 SYN3O14994 580 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 KLK10O43240 276 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 CCNT1O60563 726 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 METTL18O95568 372 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ARSAP15289 507 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 XBP1P17861 261 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 EPHB2P29323 1055 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 AVPR2P30518 371 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 MVDP53602 400 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 GHRHRQ02643 423 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 CFHR1Q03591 330 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.32□□□□□ -1.72
CD46-216ENST00000490278 STIM1Q13586 685 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 SLC9C1Q4G0N8 1177 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ARL13AQ5H913 290 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 EARS2Q5JPH6 523 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 WDR45BQ5MNZ6 344 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 C10orf76Q5T2E6 689 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 KIAA1614Q5VZ46 1190 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 CCDC70Q6NSX1 233 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 SLC30A9Q6PML9 568 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 UBE2Q1Q7Z7E8 422 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 GALNT7Q86SF2 657 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 TMTC1Q8IUR5 882 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 PAF1Q8N7H5 531 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ARL14EPQ8N8R7 260 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 DDB2Q92466 427 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 SH2D3AQ9BRG2 576 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 MOV10Q9HCE1 1003 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 WASH6PQ9NQA3 447 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ADARB2Q9NS39 739 aaKnown RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 TMEM248Q9NWD8 314 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 IFT80Q9P2H3 777 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
CD46-216ENST00000490278 ARHGEF17Q96PE2 2063 aaPredicted RBP4.32□□□□□ -1.72
CD46-216ENST00000490278 SMIM35A0A1B0GVV1 85 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 DHX16O60231 1041 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 NFATC1O95644 943 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 WEE2P0C1S8 567 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 ATP5F1P24539 256 aaPredicted RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 STAT1P42224 750 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 ARHGAP25P42331 645 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 RPS13P62277 151 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 ARHGAP8P85298 464 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 RHAGQ02094 409 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 TBL3Q12788 808 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 MAPK7Q13164 816 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 SEMA3AQ14563 771 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 DAZAP2Q15038 168 aaPredicted RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 SLC18B1Q6NT16 456 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 RNF144BQ7Z419 303 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 NEK8Q86SG6 692 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 KLBQ86Z14 1044 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 BRSK2Q8IWQ3 736 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 ADGRF4Q8IZF3 695 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 ESX1Q8N693 406 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 C2CD4CQ8TF44 421 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 IP6K1Q92551 441 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 NAP1L4Q99733 375 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 GPR63Q9BZJ6 419 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 STN1Q9H668 368 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 TLR8Q9NR97 1041 aaKnown RBP4.31□□□□□ -1.72
CD46-216ENST00000490278 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
CD46-216ENST00000490278 CYP2D7A0A087X1C5 515 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 CCDC196A0A1B0GTZ2 297 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 TP73O15350 636 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 MSI1O43347 362 aaKnown RBP4.3□□□□□ -1.72
CD46-216ENST00000490278 BCAR3O75815 825 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 CELA2AP08217 269 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 TYK2P29597 1187 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 PSMC2P35998 433 aaKnown RBP4.3□□□□□ -1.72
CD46-216ENST00000490278 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 BYSLQ13895 437 aaKnown RBP4.3□□□□□ -1.72
CD46-216ENST00000490278 GALNT3Q14435 633 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 PGM5Q15124 567 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 KIAA1755Q5JYT7 1200 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 INTS11Q5TA45 600 aaKnown RBP4.3□□□□□ -1.72
CD46-216ENST00000490278 JAKMIP3Q5VZ66 844 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 RETSATQ6NUM9 610 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 SYCE2Q6PIF2 218 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 LRIG3Q6UXM1 1119 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms