RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 UCNP55089 124 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 E2F1Q01094 437 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 RHDQ02161 417 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 PKDCCQ504Y2 493 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ZCWPW2Q504Y3 356 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ATL3Q6DD88 541 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 NADSYN1Q6IA69 706 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 SPATS2Q86XZ4 545 aaKnown RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 MMAAQ8IVH4 418 aaKnown RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 SIX6OS1Q8N1H7 587 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ZNF248Q8NDW4 579 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 SNRNP27Q8WVK2 155 aaKnown RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 IRGQQ8WZA9 623 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 TATDN2Q93075 761 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 HIC2Q96JB3 615 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ZNF578Q96N58 590 aaPredicted RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 IPO9Q96P70 1041 aaKnown RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 DDX50Q9BQ39 737 aaKnown RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 RAB20Q9NX57 234 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ARHGAP20Q9P2F6 1191 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 HESX1Q9UBX0 185 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 USP25Q9UHP3 1055 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 ERVW-1Q9UQF0 538 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 DMTF1Q9Y222 760 aa8.49□□□□□ -1.05
USP39-216ENST00000490193 COL27A1Q8IZC6 1860 aaPredicted RBP8.49□□□□□ -1.05
USP39-216ENST00000490193 GOLGA6L7A0A1B0GV03 622 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 TYW5A2RUC4 315 aaKnown RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 TTC34A8MYJ7 566 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 O00370 1275 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 SLC7A4O43246 635 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 LZTS3O60299 673 aaPredicted RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 RPL13P26373 211 aaKnown RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 MZF1P28698 734 aaPredicted RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 ME1P48163 572 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 TBX4P57082 545 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 TMPRSS3P57727 454 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 PPP2CBP62714 309 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 PPP2CAP67775 309 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 CXADRP78310 365 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 ECT2LQ008S8 904 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 KCNH2Q12809 1159 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 NNTQ13423 1086 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 ELAVL3Q14576 367 aaKnown RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 FSCBQ5H9T9 825 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 PITRM1Q5JRX3 1037 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 CDCP2Q5VXM1 449 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 LSMEM2Q8N112 164 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 GUF1Q8N442 669 aaKnown RBP8.48□□□□□ -1.05
USP39-216ENST00000490193 UBR7Q8N806 425 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 OR14C36Q8NHC7 312 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 PTPRN2Q92932 1015 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 LGMNQ99538 433 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 MMRN2Q9H8L6 949 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 KIAA1257Q9ULG3 409 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 COQ4Q9Y3A0 265 aa8.48□□□□□ -1.05
USP39-216ENST00000490193 K7ELQ4 463 aaPredicted RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 PLRG1O43660 514 aaKnown RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 STX10O60499 249 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 LUC7L3O95232 432 aaKnown RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 MOCS3O95396 460 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 MT-CO3P00414 261 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 LTFP02788 710 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 VDRP11473 427 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 CTSOP43234 321 aaPredicted RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 PSMD8P48556 350 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 ERVPABLB-1P60509 514 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 YWHAEP62258 255 aaKnown RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 RPS24P62847 133 aaKnown RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 ADAM9Q13443 819 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 CUL2Q13617 745 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 SLC12A1Q13621 1099 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 CDH18Q13634 790 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 EDRF1Q3B7T1 1238 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 MS4A13Q5J8X5 152 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 BROXQ5VW32 411 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 LCLAT1Q6UWP7 414 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 MMS22LQ6ZRQ5 1243 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 PRPF39Q86UA1 669 aaKnown RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 TRIM69Q86WT6 500 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 STK40Q8N2I9 435 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 SLC25A45Q8N413 288 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 OR4C6Q8NH72 309 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 MYEOVQ96EZ4 313 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 EEF2KMTQ96G04 330 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 SLC39A13Q96H72 371 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 FCRL2Q96LA5 508 aaPredicted RBP8.47□□□□□ -1.05
USP39-216ENST00000490193 SPAG5Q96R06 1193 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 STIM2Q9P246 746 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 SLCO3A1Q9UIG8 710 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
USP39-216ENST00000490193 TLR6Q9Y2C9 796 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms