RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 MAT2AP31153 395 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 STK19P49842 368 aaPredicted RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 YWHAEP62258 255 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 KCNH2Q12809 1159 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 CBWD6Q4V339 395 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 TAF1BQ53T94 588 aaPredicted RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 DCAF6Q58WW2 860 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 MS4A13Q5J8X5 152 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 CBWD3Q5JTY5 395 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 CBWD5Q5RIA9 395 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 RNF219Q5W0B1 726 aaPredicted RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 PMF1Q6P1K2 205 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 LCLAT1Q6UWP7 414 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 KDM7AQ6ZMT4 941 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 APCDD1Q8J025 514 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 SLC35F5Q8WV83 523 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 NAF1Q96HR8 494 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 FCRL2Q96LA5 508 aaPredicted RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 HPSEQ9Y251 543 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 PCDHB1Q9Y5F3 818 aa14.44□□□□□ -0.1
VARS-227ENST00000489979 TDRD6O60522 2096 aaKnown RBP14.44□□□□□ -0.1
VARS-227ENST00000489979 CAPN8A6NHC0 703 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 ERVH48-1M5A8F1 160 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 TRIM38O00635 465 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 SIGLEC6O43699 453 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 MAGEC1O60732 1142 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 MOCS2O96007 188 aaPredicted RBP14.43□□□□□ -0.1
VARS-227ENST00000489979 VAV1P15498 845 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 CMA1P23946 247 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 DRD3P35462 400 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 NUMBP49757 651 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 METAP1P53582 386 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 E2F1Q01094 437 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 DPYDQ12882 1025 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 TCERG1LQ5VWI1 586 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 IQCHQ86VS3 1027 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 UBR7Q8N806 425 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 ZNF248Q8NDW4 579 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 DQX1Q8TE96 717 aaKnown RBP14.43□□□□□ -0.1
VARS-227ENST00000489979 TFAP2BQ92481 460 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 CYTH4Q9UIA0 394 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 KIAA1257Q9ULG3 409 aa14.43□□□□□ -0.1
VARS-227ENST00000489979 CETN3O15182 167 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 RTN2O75298 545 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 FYNP06241 537 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 SYKP43405 635 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 DAB2P98082 770 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 LRMPQ12912 555 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 ZNF211Q13398 564 aaPredicted RBP14.42□□□□□ -0.1
VARS-227ENST00000489979 ELAVL3Q14576 367 aaKnown RBP14.42□□□□□ -0.1
VARS-227ENST00000489979 STAT4Q14765 748 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 EDRF1Q3B7T1 1238 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 DCAF17Q5H9S7 520 aaPredicted RBP14.42□□□□□ -0.1
VARS-227ENST00000489979 LGI2Q8N0V4 545 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 SLC25A45Q8N413 288 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 SLC39A13Q96H72 371 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 SERPINB11Q96P15 392 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 MIS12Q9H081 205 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 KDM4CQ9H3R0 1056 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 XPO7Q9UIA9 1087 aaKnown RBP14.42□□□□□ -0.1
VARS-227ENST00000489979 TLR6Q9Y2C9 796 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 CA5BQ9Y2D0 317 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 COQ4Q9Y3A0 265 aa14.42□□□□□ -0.1
VARS-227ENST00000489979 M0QYV0 167 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 PLRG1O43660 514 aaKnown RBP14.41□□□□□ -0.1
VARS-227ENST00000489979 NUDT1P36639 197 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 NNMTP40261 264 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 PCBP4P57723 403 aaKnown RBP14.41□□□□□ -0.1
VARS-227ENST00000489979 OVGP1Q12889 678 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 PKP1Q13835 747 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 ARHGAP40Q5TG30 622 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 RAP1GAP2Q684P5 730 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 TMEM270Q6UE05 265 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 SMYD4Q8IYR2 804 aaPredicted RBP14.41□□□□□ -0.1
VARS-227ENST00000489979 FAM131CQ96AQ9 280 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 HSFY1Q96LI6 401 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 ZNF578Q96N58 590 aaPredicted RBP14.41□□□□□ -0.1
VARS-227ENST00000489979 SPAG5Q96R06 1193 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 ZSWIM1Q9BR11 485 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 CPNE5Q9HCH3 593 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 NAALADL1Q9UQQ1 740 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 MAST4O15021 2626 aa14.41□□□□□ -0.1
VARS-227ENST00000489979 CYSRT1A8MQ03 144 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 SLC7A4O43246 635 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 FBXO21O94952 628 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 CALCAP01258 141 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 MPOP05164 745 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 PAEPP09466 180 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 PDGFRAP16234 1089 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TACR2P21452 398 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TBXAS1P24557 533 aaPredicted RBP14.4□□□□□ -0.1
VARS-227ENST00000489979 BRD2P25440 801 aaKnown RBP14.4□□□□□ -0.1
VARS-227ENST00000489979 NDUFA8P51970 172 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TMPRSS3P57727 454 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 GABREP78334 506 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 RHDQ02161 417 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 NNTQ13423 1086 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 CNGA2Q16280 664 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms