RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SERPINB11Q96P15 392 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 RAI2Q9Y5P3 530 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TRIM49BA6NDI0 452 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 ADH1BP00325 375 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 VAV1P15498 845 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 C5AR1P21730 350 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 METAP1P53582 386 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 NXPH1P58417 271 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 PPP2CBP62714 309 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 PPP2CAP67775 309 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 RAP1GAP2Q684P5 730 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 FBXL19Q6PCT2 694 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-217ENST00000489581 PPM1KQ8N3J5 372 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 NT5C1BQ96P26 610 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 ST7Q9NRC1 585 aa17.54■□□□□ 0.4
TOP3B-217ENST00000489581 FLNBO75369 2602 aaKnown RBP17.54■□□□□ 0.4
TOP3B-217ENST00000489581 TACR2P21452 398 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 MZF1P28698 734 aaPredicted RBP17.53■□□□□ 0.4
TOP3B-217ENST00000489581 FMO5P49326 533 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 C19orf57Q0VDD7 668 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 NNTQ13423 1086 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 STILQ15468 1287 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 SYPL2Q5VXT5 272 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 TAC4Q86UU9 113 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 CHSY1Q86X52 802 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 SPATS2Q86XZ4 545 aaKnown RBP17.53■□□□□ 0.4
TOP3B-217ENST00000489581 SLC39A7Q92504 469 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 NRSN2Q9GZP1 204 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 PRORYQ9H606 182 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
TOP3B-217ENST00000489581 SETXQ7Z333 2677 aaKnown RBP17.53■□□□□ 0.4
TOP3B-217ENST00000489581 RRP8O43159 456 aaKnown RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 LATO43561 262 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 MAT2AP31153 395 aaKnown RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 DRD3P35462 400 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 RXRGP48443 463 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 NUCB2P80303 420 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 RTP5Q14D33 572 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 ZC3H12AQ5D1E8 599 aaKnown RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 NAPEPLDQ6IQ20 393 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 RRAGAQ7L523 313 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 PRPF39Q86UA1 669 aaKnown RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 CCDC34Q96HJ3 373 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 SCAND2PQ9GZW5 306 aaPredicted RBP17.52■□□□□ 0.4
TOP3B-217ENST00000489581 ERVMER34-1Q9H9K5 563 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 RMND1Q9NWS8 449 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 TJP2Q9UDY2 1190 aa17.52■□□□□ 0.4
TOP3B-217ENST00000489581 CAPN9O14815 690 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 RTN2O75298 545 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 APOEP02649 317 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 PDGFRAP16234 1089 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 CKMT2P17540 419 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 NNMTP40261 264 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 ELAVL3Q14576 367 aaKnown RBP17.51■□□□□ 0.39
TOP3B-217ENST00000489581 COBLL1Q53SF7 1204 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 SFMBT2Q5VUG0 894 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 KANSL1Q7Z3B3 1105 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 CIR1Q86X95 450 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-217ENST00000489581 OXR1Q8N573 874 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 MFSD2AQ8NA29 543 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-217ENST00000489581 ARHGAP20Q9P2F6 1191 aa17.51■□□□□ 0.39
TOP3B-217ENST00000489581 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
TOP3B-217ENST00000489581 ATXN7O15265 892 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-217ENST00000489581 SDC3O75056 442 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 C1QL1O75973 258 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 GLDCP23378 1020 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 GPD2P43304 727 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 LRRC63Q05C16 580 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 POM121L1PQ3SYA9 428 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 ARHGEF19Q8IW93 802 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 LMO3Q8TAP4 145 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 FRS2Q8WU20 508 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 BTN2A3PQ96KV6 586 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 FCRL3Q96P31 734 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-217ENST00000489581 METTL14Q9HCE5 456 aaKnown RBP17.5■□□□□ 0.39
TOP3B-217ENST00000489581 CYTH4Q9UIA0 394 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 SARDHQ9UL12 918 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 CA5BQ9Y2D0 317 aa17.5■□□□□ 0.39
TOP3B-217ENST00000489581 F5H5T6 163 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 TK2O00142 265 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 SART1O43290 800 aaKnown RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 BRINP1O60477 761 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 TRUB2O95900 331 aaKnown RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 ACADSBP45954 432 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 RPL34P49207 117 aaKnown RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 PITX1P78337 314 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 ILKQ13418 452 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 SLC12A1Q13621 1099 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 STAT4Q14765 748 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 ACCSLQ4AC99 568 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 CCDC40Q4G0X9 1142 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 DENND1BQ6P3S1 775 aa17.49■□□□□ 0.39
TOP3B-217ENST00000489581 CCAR2Q8N163 923 aaKnown RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 SNIP1Q8TAD8 396 aaKnown RBP17.49■□□□□ 0.39
TOP3B-217ENST00000489581 BAP1Q92560 729 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms