RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC39A13Q96H72 371 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 FCRL2Q96LA5 508 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 TSGA10Q9BZW7 698 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 CIPCQ9C0C6 399 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SYNCQ9H7C4 482 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 CTTNBP2NLQ9P2B4 639 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SYNCRIPO60506 623 aaKnown RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 HSF2BPO75031 334 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 TRUB2O95900 331 aaKnown RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 IGLV3-25P01717 112 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 APOEP02649 317 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 TCF4P15884 667 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 NDUFV2P19404 249 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 HLA-FP30511 346 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 IL12RB1P42701 662 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 DHPSP49366 369 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 ATXN1P54253 815 aaKnown RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 EIF4EBP2Q13542 120 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 TUBB2AQ13885 445 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF234Q14588 700 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 SF3A2Q15428 464 aaKnown RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 CCDC6Q16204 474 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 CCDC14Q49A88 953 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 SH3PXD2AQ5TCZ1 1133 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 DAB2IPQ5VWQ8 1189 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 KIAA1211LQ6NV74 962 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 RFWD3Q6PCD5 774 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 CYP4V2Q6ZWL3 525 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 AHI1Q8N157 1196 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 NIPA2Q8N8Q9 360 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 HJURPQ8NCD3 748 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 FNIP1Q8TF40 1166 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 RXFP2Q8WXD0 754 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 MRGPRX1Q96LB2 322 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 NPY6RQ99463 290 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 TUBB2BQ9BVA1 445 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 SELENOOQ9BVL4 669 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 ABCB8Q9NUT2 735 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 MBD1Q9UIS9 605 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 ANAPC7Q9UJX3 599 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 RAD54BQ9Y620 910 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 EML5Q05BV3 1969 aa10.9□□□□□ -0.66
SCAMP4-208ENST00000489554 WDR87Q6ZQQ6 2873 aa10.9□□□□□ -0.67
SCAMP4-208ENST00000489554 FRYLO94915 3013 aa10.9□□□□□ -0.67
SCAMP4-208ENST00000489554 SPAG17Q6Q759 2223 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 GOLGA6L7A0A1B0GV03 622 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 WASH3PC4AMC7 463 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 DYNC1I1O14576 645 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 GDF9O60383 454 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 TBL1XO60907 577 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 PALMO75781 387 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 PROSCO94903 275 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC2A3P11169 496 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 PABPC1P11940 636 aaKnown RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 SLC6A4P31645 630 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MATKP42679 507 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 PTPN9P43378 593 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 SGSHP51688 502 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 ZNF143P52747 638 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MTA1Q13330 715 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 C15orf59Q2T9L4 293 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 FUT11Q495W5 492 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MS4A13Q5J8X5 152 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 TMEM215Q68D42 235 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 NADSYN1Q6IA69 706 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 SERPINA13PQ6UXR4 307 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 CHST9Q7L1S5 443 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 KIAA0907Q7Z7F0 614 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 METTL3Q86U44 580 aaKnown RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 CCDC117Q8IWD4 279 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 DEFB106AQ8N104 65 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 ATP6V0D2Q8N8Y2 350 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MYRIPQ8NFW9 859 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 ADAM32Q8TC27 787 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 CENPIQ92674 756 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 BTN2A3PQ96KV6 586 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 CFAP57Q96MR6 1250 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 WDR24Q96S15 920 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.89□□□□□ -0.673e-6■■■■□ 24.5
SCAMP4-208ENST00000489554 SLC12A6Q9UHW9 1150 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 PLA2G4CQ9UP65 541 aa10.89□□□□□ -0.67
SCAMP4-208ENST00000489554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 IGHV1OR15-9A0A0B4J2B8 117 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ENDOD1O94919 500 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 MOCS2O96007 188 aaPredicted RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 ATP5BP06576 529 aaKnown RBP10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 GPD1P21695 349 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 MAN1A1P33908 653 aa10.88□□□□□ -0.67
SCAMP4-208ENST00000489554 NOS2P35228 1153 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms