RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SLC5A9Q2M3M2 681 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 PARP15Q460N3 678 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 FAM153CQ494X1 144 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 PRSS36Q5K4E3 855 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 C6orf118Q5T5N4 469 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 AFMIDQ63HM1 303 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 ITPRIPL1Q6GPH6 555 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 TIGD7Q6NT04 549 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 Q6ZNB5 142 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 CHST9Q7L1S5 443 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 HOOK3Q86VS8 718 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 CCDC117Q8IWD4 279 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 ARHGAP12Q8IWW6 846 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 TP53INP2Q8IXH6 220 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 CFAP52Q8N1V2 620 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 C12orf76Q8N812 135 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 VN1R2Q8NFZ6 395 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 SH3RF2Q8TEC5 729 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 DEPDC1BQ8WUY9 529 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 ING5Q8WYH8 240 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 PRICKLE1Q96MT3 831 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 FOXP3Q9BZS1 431 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 SLC39A8Q9C0K1 460 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 ACBD3Q9H3P7 528 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 FAM153AQ9UHL3 310 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 STOML2Q9UJZ1 356 aa10.27□□□□□ -0.77
USP11-211ENST00000489111 ZFP37Q9Y6Q3 630 aaPredicted RBP10.27□□□□□ -0.77
USP11-211ENST00000489111 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 E2F8A0AVK6 867 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 TRDMT1O14717 391 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 MOSPD3O75425 235 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 RHOCP08134 193 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 CCNCP24863 283 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 FDFT1P37268 417 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ETFBP38117 255 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 LMAN1P49257 510 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 PAPOLAP51003 745 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 NRLP54845 237 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 YBEYP58557 167 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 RPS24P62847 133 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 DHX9Q08211 1270 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 ZNF177Q13360 481 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 SLMAPQ14BN4 828 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 POLD3Q15054 466 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 ANO4Q32M45 955 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 C5orf22Q49AR2 442 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 TCEAL5Q5H9L2 206 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ANKRD20A2Q5SQ80 823 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ARTNQ5T4W7 220 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 RNASEH2BQ5TBB1 312 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 ANKRD20A1Q5TYW2 823 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ANKRD20A3Q5VUR7 823 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 HIBCHQ6NVY1 386 aaPredicted RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 PPP1R21Q6ZMI0 780 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 HTR3DQ70Z44 454 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 TMC3Q7Z5M5 1100 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ZCCHC9Q8N567 271 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 EFHBQ8N7U6 833 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ADAMTS19Q8TE59 1207 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 WBP2Q969T9 261 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 MYEOVQ96EZ4 313 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 HMCESQ96FZ2 354 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 TSGA13Q96PP4 275 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 VAT1Q99536 393 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 CEP41Q9BYV8 373 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ZNF576Q9H609 170 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 SP110Q9HB58 689 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 TDP1Q9NUW8 608 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 NDFIP2Q9NV92 336 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 ZNF446Q9NWS9 450 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 IPO11Q9UI26 975 aaKnown RBP10.26□□□□□ -0.77
USP11-211ENST00000489111 TRHDEQ9UKU6 1024 aa10.26□□□□□ -0.77
USP11-211ENST00000489111 MATN3O15232 486 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CHADO15335 359 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 GREM1O60565 184 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 TBL1XO60907 577 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 PRAMEF12O95522 483 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CYBBP04839 570 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 APRTP07741 180 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 FSHRP23945 695 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 PTPN3P26045 913 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CHKAP35790 457 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 HSPA9P38646 679 aaKnown RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 ARL4CP56559 192 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 IFI35P80217 286 aaPredicted RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 GNA12Q03113 381 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 WASHC5Q12768 1159 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 HYAL1Q12794 435 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 USP4Q13107 963 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CDH18Q13634 790 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CASP8Q14790 479 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 FAXCQ5TGI0 409 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 RHBDF2Q6PJF5 856 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ARHGAP36Q6ZRI8 547 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CENPUQ71F23 418 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 SETD3Q86TU7 594 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms