RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CAPN10Q9HC96 672 aa25.74■■□□□ 1.71
HMGN1-217ENST00000489072 RTN4Q9NQC3 1192 aaKnown RBP25.74■■□□□ 1.71
HMGN1-217ENST00000489072 SMTNL1A8MU46 457 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 GJB6O95452 261 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 SERPINF2P08697 491 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ENGP17813 658 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ZNF165P49910 485 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ZBTB16Q05516 673 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 CLEC16AQ2KHT3 1053 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 RAB6CQ53S08 254 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ALFQ53S48 1182 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 C9orf64Q5T6V5 341 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ZNF776Q68DI1 518 aaPredicted RBP25.73■■□□□ 1.71
HMGN1-217ENST00000489072 RGL4Q8IZJ4 473 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 CADM4Q8NFZ8 388 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 RAB6CQ9H0N0 254 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 SLC6A14Q9UN76 642 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 PAXBP1Q9Y5B6 917 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 OR51B4Q9Y5P0 310 aa25.73■■□□□ 1.71
HMGN1-217ENST00000489072 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.72■■□□□ 1.71
HMGN1-217ENST00000489072 CLDN11O75508 207 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 ACSL1P33121 698 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 RDXP35241 583 aaKnown RBP25.72■■□□□ 1.71
HMGN1-217ENST00000489072 OXCT1P55809 520 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 ZNF177Q13360 481 aaPredicted RBP25.72■■□□□ 1.71
HMGN1-217ENST00000489072 IQCB1Q15051 598 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 WDR45BQ5MNZ6 344 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 SYCP2LQ5T4T6 812 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 RNF219Q5W0B1 726 aaPredicted RBP25.72■■□□□ 1.71
HMGN1-217ENST00000489072 FAM131BQ86XD5 332 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 JOSD2Q8TAC2 188 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 DNASE2BQ8WZ79 361 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 FEM1AQ9BSK4 669 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 TBC1D30Q9Y2I9 924 aa25.72■■□□□ 1.71
HMGN1-217ENST00000489072 KNL1Q8NG31 2342 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 EDDM13A0A1B0GTR0 161 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 METTL12A8MUP2 240 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 MEI4A8MW99 385 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 ENDOD1O94919 500 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 DNTTP04053 509 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 MAPK8P45983 427 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 NSFP46459 744 aaKnown RBP25.71■■□□□ 1.71
HMGN1-217ENST00000489072 CDH4P55283 916 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 ATP11AP98196 1134 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 DCAF12L1Q5VU92 463 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 RABEPKQ7Z6M1 372 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 RXFP2Q8WXD0 754 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 C1orf74Q96LT6 269 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 AGPAT1Q99943 283 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 TMEM51Q9NW97 253 aa25.71■■□□□ 1.71
HMGN1-217ENST00000489072 TARSL2A2RTX5 802 aaKnown RBP25.7■■□□□ 1.7
HMGN1-217ENST00000489072 DRGXA6NNA5 263 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 VAV1P15498 845 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 SULT2A1Q06520 285 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 C15orf59Q2T9L4 293 aaPredicted RBP25.7■■□□□ 1.7
HMGN1-217ENST00000489072 KLHL40Q2TBA0 621 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 CCDC14Q49A88 953 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 SH3PXD2AQ5TCZ1 1133 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 PHF13Q86YI8 300 aaPredicted RBP25.7■■□□□ 1.7
HMGN1-217ENST00000489072 BAP1Q92560 729 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 PTPRN2Q92932 1015 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 FAM129BQ96TA1 746 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 PABPC3Q9H361 631 aaKnown RBP25.7■■□□□ 1.7
HMGN1-217ENST00000489072 C6orf106Q9H6K1 298 aaPredicted RBP25.7■■□□□ 1.7
HMGN1-217ENST00000489072 ADAM22Q9P0K1 906 aa25.7■■□□□ 1.7
HMGN1-217ENST00000489072 IGLV3-10A0A075B6K4 115 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 SYCE3A1L190 88 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 C2CD4BA6NLJ0 364 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 E9PAM4 449 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 KCNA4P22459 653 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 GSCP56915 257 aaPredicted RBP25.69■■□□□ 1.7
HMGN1-217ENST00000489072 GFPT1Q06210 699 aaPredicted RBP25.69■■□□□ 1.7
HMGN1-217ENST00000489072 TTC31Q49AM3 519 aaPredicted RBP25.69■■□□□ 1.7
HMGN1-217ENST00000489072 DAB2IPQ5VWQ8 1189 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 MON1BQ7L1V2 547 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 IRF2BP2Q7Z5L9 587 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 STK40Q8N2I9 435 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 FRS2Q8WU20 508 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 NAP1L5Q96NT1 182 aaPredicted RBP25.69■■□□□ 1.7
HMGN1-217ENST00000489072 HAPLN3Q96S86 360 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 SEPT11Q9NVA2 429 aaKnown RBP25.69■■□□□ 1.7
HMGN1-217ENST00000489072 MPP6Q9NZW5 540 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 SERGEFQ9UGK8 458 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 SUSD2Q9UGT4 822 aa25.69■■□□□ 1.7
HMGN1-217ENST00000489072 FERP16591 822 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 CST6Q15828 149 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 CDO1Q16878 200 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 UAP1L1Q3KQV9 507 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 LRRC31Q6UY01 552 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 MMAAQ8IVH4 418 aaKnown RBP25.68■■□□□ 1.7
HMGN1-217ENST00000489072 ZCCHC9Q8N567 271 aaKnown RBP25.68■■□□□ 1.7
HMGN1-217ENST00000489072 OR2I1PQ8NGU4 316 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 SYT11Q9BT88 431 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 GTPBP2Q9BX10 602 aaKnown RBP25.68■■□□□ 1.7
HMGN1-217ENST00000489072 BTBD1Q9H0C5 482 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 PCED1AQ9H1Q7 454 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 VPS28Q9UK41 221 aa25.68■■□□□ 1.7
HMGN1-217ENST00000489072 A0A1B0GTH6 734 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 ARHGAP33O14559 1287 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 MID1O15344 667 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms