RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SNED1Q8TER0 1413 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 STMND1H3BQB6 276 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 GOLIM4O00461 696 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 KAT7O95251 611 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 RPL17P18621 184 aaKnown RBP3.02□□□□□ -1.93
CCDC93-209ENST00000488908 ANOS1P23352 680 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 TNFSF8P32971 234 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 RAB27AP51159 221 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 SHC2P98077 582 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 ATP1A4Q13733 1029 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 STPG1Q5TH74 334 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 ERAP2Q6P179 960 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 DARS2Q6PI48 645 aaKnown RBP3.02□□□□□ -1.93
CCDC93-209ENST00000488908 USP17L6PQ6QN14 398 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 EXD3Q8N9H8 876 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 LILRB1Q8NHL6 650 aaPredicted RBP3.02□□□□□ -1.93
CCDC93-209ENST00000488908 FAR2Q96K12 515 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 ADAD1Q96M93 576 aaKnown RBP3.02□□□□□ -1.93
CCDC93-209ENST00000488908 UHRF2Q96PU4 802 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 CDH19Q9H159 772 aa3.02□□□□□ -1.93
CCDC93-209ENST00000488908 KCNJ18B7U540 433 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 VIPP01282 170 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 ALDOCP09972 364 aaKnown RBP3.01□□□□□ -1.93
CCDC93-209ENST00000488908 STAT1P42224 750 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 AAGABQ6PD74 315 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 CCDC149Q6ZUS6 474 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 ZNF771Q7L3S4 317 aaPredicted RBP3.01□□□□□ -1.93
CCDC93-209ENST00000488908 CCDC28AQ8IWP9 274 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 DPP10Q8N608 796 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 IP6K1Q92551 441 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 NPIPB3Q92617 1050 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 LRRC46Q96FV0 321 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 ADGRG7Q96K78 797 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 EGLN1Q9GZT9 426 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 ZNF304Q9HCX3 659 aa3.01□□□□□ -1.93
CCDC93-209ENST00000488908 TRBV5-7A0A0A0MS05 114 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 LINC01553A4QN01 128 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 OR2W5A6NFC9 320 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 CLCA1A8K7I4 914 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 F8W8V4 182 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 NPC1O15118 1278 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 SOX30O94993 753 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 AMD1P17707 334 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 GNLYP22749 145 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 PEX2P28328 305 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 ERVK11-1P61568 191 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 SNTA1Q13424 505 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 KIAA0753Q2KHM9 967 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 MINDY4Q4G0A6 757 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 CXorf57Q6NSI4 855 aaKnown RBP3□□□□□ -1.93
CCDC93-209ENST00000488908 PPP4R4Q6NUP7 873 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 CCDC25Q86WR0 208 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 KLBQ86Z14 1044 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 LRRC57Q8N9N7 239 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 POC1AQ8NBT0 407 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 CCDC150Q8NCX0 1101 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 FAM156AQ8NDB6 213 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 IL17FQ96PD4 163 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 SORBS1Q9BX66 1292 aaKnown RBP3□□□□□ -1.93
CCDC93-209ENST00000488908 MAGEB5Q9BZ81 275 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 UNKQ9C0B0 810 aaKnown RBP3□□□□□ -1.93
CCDC93-209ENST00000488908 OSBPL5Q9H0X9 879 aaPredicted RBP3□□□□□ -1.93
CCDC93-209ENST00000488908 KLHL31Q9H511 634 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 KCNK9Q9NPC2 374 aa3□□□□□ -1.93
CCDC93-209ENST00000488908 COL2A1P02458 1487 aaPredicted RBP3□□□□□ -1.93
CCDC93-209ENST00000488908 SAA2-SAA4A0A096LPE2 208 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 IGLV5-52A0A0A0MRZ9 124 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 GXYLT2A0PJZ3 443 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 C3orf70A6NLC5 250 aaPredicted RBP2.99□□□□□ -1.93
CCDC93-209ENST00000488908 A6NNZ2 444 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 AREL1O15033 823 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 LDB2O43679 373 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 SERPINI2O75830 405 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 TBX6O95947 436 aaPredicted RBP2.99□□□□□ -1.93
CCDC93-209ENST00000488908 ALDOAP04075 364 aaKnown RBP2.99□□□□□ -1.93
CCDC93-209ENST00000488908 NAGAP17050 411 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 IGFBP2P18065 325 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 AVPR1AP37288 418 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 FAM193AP78312 1265 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 TROAPQ12815 778 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 EFHC1Q5JVL4 640 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 PLEKHA7Q6IQ23 1121 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 RETSATQ6NUM9 610 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 TMEM88Q6PEY1 159 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 KIAA0408Q6ZU52 694 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 MDGA2Q7Z553 956 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 SMIM29Q86T20 159 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 TTC30AQ86WT1 665 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 PALB2Q86YC2 1186 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 NAGSQ8N159 534 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 ZNF485Q8NCK3 441 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 CMASQ8NFW8 434 aaPredicted RBP2.99□□□□□ -1.93
CCDC93-209ENST00000488908 ZIM2Q9NZV7 527 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 FBXO4Q9UKT5 387 aa2.99□□□□□ -1.93
CCDC93-209ENST00000488908 SRPRBQ9Y5M8 271 aaKnown RBP2.99□□□□□ -1.93
CCDC93-209ENST00000488908 HRGP04196 525 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 IDEP14735 1019 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 TMPRSS3P57727 454 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms