RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 NCAPHQ15003 741 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 C9orf64Q5T6V5 341 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
MECP2-210ENST00000488293 CXorf57Q6NSI4 855 aaKnown RBP13.72□□□□□ -0.21
MECP2-210ENST00000488293 PSAPL1Q6NUJ1 521 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 USP30Q70CQ3 517 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
MECP2-210ENST00000488293 HDDC3Q8N4P3 179 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 PCMTD1Q96MG8 357 aaPredicted RBP13.72□□□□□ -0.21
MECP2-210ENST00000488293 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 TBCBQ99426 244 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 FEM1AQ9BSK4 669 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 GTPBP2Q9BX10 602 aaKnown RBP13.72□□□□□ -0.21
MECP2-210ENST00000488293 ZDHHC5Q9C0B5 715 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 HSD3B7Q9H2F3 369 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 MTG2Q9H4K7 406 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 SLCO3A1Q9UIG8 710 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 TBC1D30Q9Y2I9 924 aa13.72□□□□□ -0.21
MECP2-210ENST00000488293 TTC34A8MYJ7 566 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 UPK3BL1B0FP48 263 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 UPK3BL2E5RIL1 263 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 GOLGA8SH3BPF8 625 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 OPHN1O60890 802 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 SEMA4FO95754 770 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 MMP8P22894 467 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 MZF1P28698 734 aaPredicted RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 FLT3P36888 993 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 CENPCQ03188 943 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 TYRO3Q06418 890 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 SEMA3BQ13214 749 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 C2CD6Q53TS8 623 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 SH3PXD2AQ5TCZ1 1133 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 LRRC31Q6UY01 552 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 APTXQ7Z2E3 356 aaKnown RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 BNIPLQ7Z465 357 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 C14orf80Q86SX3 495 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 MINDY1Q8N5J2 469 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 ALG14Q96F25 216 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 RPL10LQ96L21 214 aaKnown RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 MIR1-1HGQ9H1L0 117 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 FSCN3Q9NQT6 498 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 ANLNQ9NQW6 1124 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 TMEM63CQ9P1W3 806 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.21
MECP2-210ENST00000488293 TMEM131Q92545 1883 aa13.71□□□□□ -0.21
MECP2-210ENST00000488293 PLXNA2O75051 1894 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 DRGXA6NNA5 263 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 I6L893 689 aaPredicted RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 ENDOD1O94919 500 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 UNGP13051 313 aaPredicted RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 GGCXP38435 758 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 STK19P49842 368 aaPredicted RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 IRAK1P51617 712 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 SLC14A1Q13336 389 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 CST6Q15828 149 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 TRNP1Q6NT89 227 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 MMAAQ8IVH4 418 aaKnown RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 ZNF683Q8IZ20 524 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 ZCCHC9Q8N567 271 aaKnown RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 C1orf216Q8TAB5 229 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 PTPRN2Q92932 1015 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 CFAP57Q96MR6 1250 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 HAPLN3Q96S86 360 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 FAM129BQ96TA1 746 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 SLC32A1Q9H598 525 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 OSGEPQ9NPF4 335 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 FBXL12Q9NXK8 326 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 FZD4Q9ULV1 537 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.7□□□□□ -0.22
MECP2-210ENST00000488293 OR51B4Q9Y5P0 310 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 CHD5Q8TDI0 1954 aa13.7□□□□□ -0.22
MECP2-210ENST00000488293 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 GIPC1O14908 333 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 ATP9BO43861 1147 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 CNTN5O94779 1100 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 C5AR1P21730 350 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 PMLP29590 882 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 SLC8A1P32418 973 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 GRIK2Q13002 908 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 ELAVL3Q14576 367 aaKnown RBP13.69□□□□□ -0.22
MECP2-210ENST00000488293 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 SETD3Q86TU7 594 aaPredicted RBP13.69□□□□□ -0.22
MECP2-210ENST00000488293 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 SLC30A5Q8TAD4 765 aa13.69□□□□□ -0.22
MECP2-210ENST00000488293 GANCQ8TET4 914 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms